Cloufield/GWASLab-Reference
GWASLab reference datasets Processed genomic reference files used by GWASLab (download_ref / gwaslab download ref). This dataset replaces the previous Dropbox hosting for GWASLab-processed panels. Official dbSNP VCFs, UCSC FASTA, Ensembl/RefSeq GTF, and liftOver chains stay at their original hosts. Package catalog: reference.json. Checksums for every file in this repo are in md5sum.txt. Download with GWASLab import gwaslab as gl gl.download_ref("1kg_eas_hg19")… See the full description on the dataset page: https://huggingface.co/datasets/Cloufield/GWASLab-Reference.
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1*.7z filter=lfs diff=lfs merge=lfs -text2*.arrow filter=lfs diff=lfs merge=lfs -text3*.avro filter=lfs diff=lfs merge=lfs -text4*.bin filter=lfs diff=lfs merge=lfs -text5*.bz2 filter=lfs diff=lfs merge=lfs -text6*.ckpt filter=lfs diff=lfs merge=lfs -text7*.ftz filter=lfs diff=lfs merge=lfs -text8*.gz filter=lfs diff=lfs merge=lfs -text9*.h5 filter=lfs diff=lfs merge=lfs -text10*.joblib filter=lfs diff=lfs merge=lfs -text11*.lfs.* filter=lfs diff=lfs merge=lfs -text12*.lz4 filter=lfs diff=lfs merge=lfs -text13*.mds filter=lfs diff=lfs merge=lfs -text14*.mlmodel filter=lfs diff=lfs merge=lfs -text15*.model filter=lfs diff=lfs merge=lfs -text16*.msgpack filter=lfs diff=lfs merge=lfs -text17*.npy filter=lfs diff=lfs merge=lfs -text18*.npz filter=lfs diff=lfs merge=lfs -text19*.onnx filter=lfs diff=lfs merge=lfs -text20*.ot filter=lfs diff=lfs merge=lfs -text21*.parquet filter=lfs diff=lfs merge=lfs -text22*.pb filter=lfs diff=lfs merge=lfs -text23*.pickle filter=lfs diff=lfs merge=lfs -text24*.pkl filter=lfs diff=lfs merge=lfs -text25*.pt filter=lfs diff=lfs merge=lfs -text26*.pth filter=lfs diff=lfs merge=lfs -text27*.rar filter=lfs diff=lfs merge=lfs -text28*.safetensors filter=lfs diff=lfs merge=lfs -text29saved_model/**/* filter=lfs diff=lfs merge=lfs -text30*.tar.* filter=lfs diff=lfs merge=lfs -text31*.tar filter=lfs diff=lfs merge=lfs -text32*.tflite filter=lfs diff=lfs merge=lfs -text33*.tgz filter=lfs diff=lfs merge=lfs -text34*.wasm filter=lfs diff=lfs merge=lfs -text35*.xz filter=lfs diff=lfs merge=lfs -text36*.zip filter=lfs diff=lfs merge=lfs -text37*.zst filter=lfs diff=lfs merge=lfs -text38*tfevents* filter=lfs diff=lfs merge=lfs -text39# Audio files - uncompressed40*.pcm filter=lfs diff=lfs merge=lfs -text41*.sam filter=lfs diff=lfs merge=lfs -text42*.raw filter=lfs diff=lfs merge=lfs -text43# Audio files - compressed44*.aac filter=lfs diff=lfs merge=lfs -text45*.flac filter=lfs diff=lfs merge=lfs -text46*.mp3 filter=lfs diff=lfs merge=lfs -text47*.ogg filter=lfs diff=lfs merge=lfs -text48*.wav filter=lfs diff=lfs merge=lfs -text49# Image files - uncompressed50*.bmp filter=lfs diff=lfs merge=lfs -text51*.gif filter=lfs diff=lfs merge=lfs -text52*.png filter=lfs diff=lfs merge=lfs -text53*.tiff filter=lfs diff=lfs merge=lfs -text54# Image files - compressed55*.jpg filter=lfs diff=lfs merge=lfs -text56*.jpeg filter=lfs diff=lfs merge=lfs -text57*.webp filter=lfs diff=lfs merge=lfs -text58# Video files - compressed59*.mp4 filter=lfs diff=lfs merge=lfs -text60*.webm filter=lfs diff=lfs merge=lfs -text611kg/hg19/AFR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text621kg/hg19/AMR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text631kg/hg19/EAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text641kg/hg19/EUR.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text651kg/hg19/PAN.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text661kg/hg19/SAS.ALL.split_norm_af.1kgp3v5.hg19.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text671kg/hg38/AFR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text681kg/hg38/AMR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text691kg/hg38/EAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text701kg/hg38/EUR.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text711kg/hg38/PAN.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text721kg/hg38/SAS.ALL.split_norm_af.1kg_30x.hg38.vcf.gz.tbi filter=lfs diff=lfs merge=lfs -text73 