Apppublic

Tsimech2000/Codon_Translator

sourceHugging Facemitupdated 2mo agoView on Hugging Face

0likes

App README

Codon Translator

A validated DNA/mRNA translation and teaching tool with codon-level reporting.

Features

—Plain sequence and FASTA input
—DNA, RNA, and IUPAC ambiguity codes
—All six reading frames and reverse-complement translation
—Selected-frame or first start-to-stop ORF translation
—Standard and vertebrate mitochondrial genetic codes
—Codon report with DNA and mRNA notation
—Protein/nucleotide FASTA and CSV downloads
—GC content and estimated unmodified peptide mass
—Corrected 2D structures for all 20 standard amino acids

Scientific scope

The tool is intended for education and sequence triage. It does not perform gene prediction, splice-aware translation, codon-usage optimization, or post-translational-modification analysis. Verify critical results using a curated bioinformatics workflow.

Local development

bash

python -m pip install -r requirements.txt
streamlit run app.py

Tests

bash

python -m unittest discover -s tests -v