Team Ai
Datasetpublic

MihinP/PartiNet_aux_maps

Auxiliary cryo-EM maps for PartiNet particle picking benchmark This dataset contains reconstructed cryo-EM density maps generated using three different particle picking methods (PartiNet, Topaz, and crYOLO) across multiple test EMPIAR datasets. The maps are provided as supplementary data to support the findings presented in our publication but fall outside the scope of standard EMDB/EMPIAR deposition. Contents: Aldolase (10215): Reconstructions from PartiNet, Topaz, and crYOLO… See the full description on the dataset page: https://huggingface.co/datasets/MihinP/PartiNet_aux_maps.

sourceHugging Facemitupdated 9mo agoView on Hugging Face
0likes89downloads
Dataset Card

Auxiliary cryo-EM maps for PartiNet particle picking benchmark

This dataset contains reconstructed cryo-EM density maps generated using three different particle picking methods (PartiNet, Topaz, and crYOLO) across multiple test EMPIAR datasets. The maps are provided as supplementary data to support the findings presented in our publication but fall outside the scope of standard EMDB/EMPIAR deposition.

Contents:

  • —Aldolase (10215): Reconstructions from PartiNet, Topaz, and crYOLO particle picks
  • —Ankyrin-1 (11043): Separate reconstructions for ankyrin and band3 complexes
  • —CryoPPP datasets (10017, 10081, 10093, 10345, 10389, 10532, 11056): Comparative reconstructions using all three picking methods
  • —MlaCD (12531): Two stoichiometric variants (1:6 and 2:6)
  • —TcdA1 (10089): Reconstructions from all three particle picking methods

Each dataset includes half-maps, sharpened maps, FSC masks and curves to enable independent validation and analysis.

File format: MRC (cryo-EM density maps) and XML (FSC metadata)