OpenScientificCodeRegistry/Database
Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.
05.6k
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/lakgroup/eclipse",4 "url": "https://github.com/LakGroup/ECLiPSE",5 "host": "github.com",6 "commit": "4021713639d6c74087891952159c682ff9f99d15",7 "license": "GPL-3.0",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11 {12 "path": "ExampleScript.m",13 "sha256": "f72e41604b9dfb8f8686af0cff3eb52d12382cb6950f534d55ecd16074a19ee8",14 "language": "MATLAB",15 "lines": 514,16 "truncated": false,17 "block": 15,18 "row": 442619 },20 {21 "path": "ExampleScript3D.m",22 "sha256": "f5d1679cbf48cdbe11c0976d0b3f56d100fbdf1985fbf33595bc2b3f0e97c984",23 "language": "MATLAB",24 "lines": 434,25 "truncated": false,26 "block": 15,27 "row": 426828 },29 {30 "path": "LICENSE",31 "sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",32 "language": "License",33 "lines": 674,34 "truncated": false,35 "block": 1,36 "row": 223537 },38 {39 "path": "README.md",40 "sha256": "88d091f286d20d2e953586bcff5e1b26fdfac9e95b98ff4c2e9193dcb1153d79",41 "language": "Text",42 "lines": 40,43 "truncated": false,44 "block": 16,45 "row": 725946 },47 {48 "path": "Utilities/AutoScale.m",49 "sha256": "8dd2b26f208a559fd282e892251ea633dcec5af63bdf0a62cbfbfbcfc201bedf",50 "language": "MATLAB",51 "lines": 41,52 "truncated": false,53 "block": 14,54 "row": 2242155 },56 {57 "path": "Utilities/CalcDescriptors.m",58 "sha256": "d6106029aa711f9bf4f3aeb203a1d8a7ba76242f67fe4f1b95f358d04a4891db",59 "language": "MATLAB",60 "lines": 247,61 "truncated": false,62 "block": 15,63 "row": 409164 },65 {66 "path": "Utilities/CalcDescriptors3D.m",67 "sha256": "14aafc01a3e7f2294ef4d25fb7393649fe1fd10d5f418ccd27735caea4dae6e8",68 "language": "MATLAB",69 "lines": 245,70 "truncated": false,71 "block": 15,72 "row": 414873 },74 {75 "path": "Utilities/ClassificationPrediction.m",76 "sha256": "78f9368c0fc3f655e535cc8dc8b791f3ca81151ece547852274100fe8dd9ce1c",77 "language": "MATLAB",78 "lines": 256,79 "truncated": false,80 "block": 15,81 "row": 347782 },83 {84 "path": "Utilities/ClassificationTrain.m",85 "sha256": "021674e0a0aa967761cd30b93949b3eb6bf3d3a6b17a459a7a35f2fb0027864c",86 "language": "MATLAB",87 "lines": 399,88 "truncated": false,89 "block": 15,90 "row": 420091 },92 {93 "path": "Utilities/ClusterPlots.m",94 "sha256": "3e71398bf9a274e0408488cc4706be9778f7d2f4ddd5cca7580419fc00e66c1a",95 "language": "MATLAB",96 "lines": 135,97 "truncated": false,98 "block": 15,99 "row": 1610100 },101 {102 "path": "Utilities/ConfusionMatPlots.m",103 "sha256": "5cd85895969c1065129ec932f5064a4d14808d505a6fef6fe11270f8e15ffaf7",104 "language": "MATLAB",105 "lines": 324,106 "truncated": false,107 "block": 15,108 "row": 3838109 },110 {111 "path": "Utilities/CreateTrainData.m",112 "sha256": "ca7e30afa58d12dfa3b8845cfcaaa908e4f0d3707b3336300aa6ab770f5c3ccf",113 "language": "MATLAB",114 "lines": 153,115 "truncated": false,116 "block": 15,117 "row": 2256118 },119 {120 "path": "Utilities/Curvature.m",121 "sha256": "45174ec26e4aaa88eec1a052a790f7f964390a4066e8164c44888a85ea3c3335",122 "language": "MATLAB",123 "lines": 77,124 "truncated": false,125 "block": 15,126 "row": 735127 },128 {129 "path": "Utilities/Endpoint_fcn.m",130 "sha256": "e13be425c186eedb0c3b45e371a6d8ab47a62aac3c839ffd824bb09321abdd10",131 "language": "MATLAB",132 "lines": 51,133 "truncated": false,134 "block": 14,135 "row": 23233136 },137 {138 "path": "Utilities/Energy.m",139 "sha256": "6e9ecbe72f6566eeda736cdb40cb2d2b6b990bf0d2f12f254f86c20cd43722c7",140 "language": "MATLAB",141 "lines": 49,142 "truncated": false,143 "block": 14,144 "row": 23645145 },146 {147 "path": "Utilities/ExtractBranches.m",148 "sha256": "27ff175aa5a0cac488832554fdec0e6d57b1c1f0cfb9a7daa0fa57522de70e62",149 "language": "MATLAB",150 "lines": 222,151 "truncated": false,152 "block": 15,153 "row": 3713154 },155 {156 "path": "Utilities/FindBorders.m",157 "sha256": "a247a7a8f2cb3f448625d64d86a6652e8c744774b684d83a2d8c28d754cb963f",158 "language": "MATLAB",159 "lines": 120,160 "truncated": false,161 "block": 1,162 "row": 3910163 },164 {165 "path": "Utilities/Fractals/HausdorffDim.m",166 "sha256": "70c0945a6a7676f79b695d30f725ae0730f8a111746c0fab0574be232d2f67d4",167 "language": "MATLAB",168 "lines": 80,169 "truncated": false,170 "block": 14,171 "row": 24188172 },173 {174 "path": "Utilities/Fractals/LocalMinkowskiBouligandDim.m",175 "sha256": "5a00b4b2bdf3564e928542d14c995d88c6481ac7806c34cb7d132a994666ed5b",176 "language": "MATLAB",177 "lines": 11,178 "truncated": false,179 "block": 14,180 "row": 18010181 },182 {183 "path": "Utilities/Fractals/MinkowskiSausageDim.m",184 "sha256": "917b79bbd61f978fc2a81bcbd8e88a438c96d82c45681b43189b80a3865d6614",185 "language": "MATLAB",186 "lines": 112,187 "truncated": false,188 "block": 15,189 "row": 748190 },191 {192 "path": "Utilities/Fractals/boxcount.m",193 "sha256": "d03b5522992f9c9ef8a3f955faf73e8c69cc4ddc4667c90c81c3a3fd0cbf0733",194 "language": "MATLAB",195 "lines": 170,196 "truncated": false,197 "block": 15,198 "row": 1810199 },200 {201 "path": "Utilities/HistogramPlots.m",202 "sha256": "55e1ce857698e29309b6009783214ccb1a951b6532bd1858cce005243905fc93",203 "language": "MATLAB",204 "lines": 212,205 "truncated": false,206 "block": 15,207 "row": 2842208 },209 {210 "path": "Utilities/ImageProperties.m",211 "sha256": "3c80373288484addd35fa301aff53c694a3492c988eb0c7feef5f66a2ba1baf8",212 "language": "MATLAB",213 "lines": 74,214 "truncated": false,215 "block": 15,216 "row": 1499217 },218 {219 "path": "Utilities/ImageTransformCloud.m",220 "sha256": "d7932c00b05c21201e6e2ebff8d20169b76156738f4a29bc0a0e1c19bb622668",221 "language": "MATLAB",222 "lines": 95,223 "truncated": false,224 "block": 15,225 "row": 1932226 },227 {228 "path": "Utilities/MakeGrayscaleImage.m",229 "sha256": "0ece991368bce3309698fac5557e319c9adc262f31ee8b0920e5f78b94678dc5",230 "language": "MATLAB",231 "lines": 107,232 "truncated": false,233 "block": 15,234 "row": 2283235 },236 {237 "path": "Utilities/MomentCalculation.m",238 "sha256": "cb9470d42e5d30420206f06ff04c4cbd23f4e97dc40e8027575820c180c25530",239 "language": "MATLAB",240 "lines": 70,241 "truncated": false,242 "block": 15,243 "row": 138244 },245 {246 "path": "Utilities/PCAPlots.m",247 "sha256": "460515e0bbaf8659ab042e1e0cfa48890e92ef376983540278dfbc3074d759aa",248 "language": "MATLAB",249 "lines": 273,250 "truncated": false,251 "block": 15,252 "row": 3317253 },254 {255 "path": "Utilities/RemoveNaNInf.m",256 "sha256": "70d4dfb4b996ab94793b4534770a124de2204ecce25044382e83dff1e920e5c3",257 "language": "MATLAB",258 "lines": 98,259 "truncated": false,260 "block": 14,261 "row": 25051262 },263 {264 "path": "Utilities/Utilities3D/ExtractBranches3D.m",265 "sha256": "1e90fcf6949cf556d68572c34266976878ff8d00a2a6ed8c8036c2bb4aaf212a",266 "language": "MATLAB",267 "lines": 295,268 "truncated": false,269 "block": 15,270 "row": 3818271 },272 {273 "path": "Utilities/Utilities3D/ImageCloud3D.m",274 "sha256": "565f88cfa0a94a4704123ad4be5c8355a5f737ebe28a48b5a34430a73b54d988",275 "language": "MATLAB",276 "lines": 80,277 "truncated": false,278 "block": 15,279 "row": 729280 },281 {282 "path": "Utilities/Utilities3D/ImageProperties3D.m",283 "sha256": "de90e36ce7e1437b338285ab012cca36e17a91cd0b584b3aaea55f2eae81660b",284 "language": "MATLAB",285 "lines": 148,286 "truncated": false,287 "block": 15,288 "row": 2856289 },290 {291 "path": "Utilities/Utilities3D/MomentCalculation3D.m",292 "sha256": "359b2d337bf116f0860ba6cee583a5dd9f2a9966778ed809aece12b3a101003a",293 "language": "MATLAB",294 "lines": 137,295 "truncated": false,296 "block": 15,297 "row": 1811298 },299 {300 "path": "Utilities/Utilities3D/imEntropy.m",301 "sha256": "ff4479c5610acfd027bc27a2836a653e3d972924afdfdb9b3ea258e1d8a2d0dd",302 "language": "MATLAB",303 "lines": 56,304 "truncated": false,305 "block": 14,306 "row": 21725307 },308 {309 "path": "Utilities/Utilities3D/imEuler3d.m",310 "sha256": "186ae25f1d25c43619b0afa43671700afbc87b6d81f6a6288b6451ad9db3b9fd",311 "language": "MATLAB",312 "lines": 620,313 "truncated": false,314 "block": 15,315 "row": 4333316 },317 {318 "path": "Utilities/Utilities3D/imHistogram.m",319 "sha256": "27dd511d848491c6c32974ee5d8012c547a4869254f5f0984054534586cb51c4",320 "language": "MATLAB",321 "lines": 232,322 "truncated": false,323 "block": 15,324 "row": 2032325 },326 {327 "path": "Utilities/Utilities3D/imMeanBreadth.m",328 "sha256": "6a220884881ab8f77b61104183fd207beff8d49b73c916fb1369af1868bb9a90",329 "language": "MATLAB",330 "lines": 296,331 "truncated": false,332 "block": 15,333 "row": 3115334 },335 {336 "path": "Utilities/Utilities3D/sphericalCapsAreaC26.m",337 "sha256": "f548427d12900725684a3ca41bceb378530d99159aa006b835e06dd5400f5bc1",338 "language": "MATLAB",339 "lines": 1186,340 "truncated": false,341 "block": 15,342 "row": 4629343 },344 {345 "path": "Utilities/Variable Selection/bipls_NotPLSToolbox.m",346 "sha256": "a97a0a86253ee507826f7f943e6d43bf58a97836b76dc9e9430ebb53f39fbec0",347 "language": "MATLAB",348 "lines": 190,349 "truncated": false,350 "block": 15,351 "row": 2415352 },353 {354 "path": "Utilities/Variable Selection/bipls_sub_iPLSreverse.m",355 "sha256": "1b3fdf47e35b46c3496d5079a3a7a0788afff0782bf30b58f075e4099085ff0b",356 "language": "MATLAB",357 "lines": 93,358 "truncated": false,359 "block": 15,360 "row": 280361 },362 {363 "path": "Utilities/Variable Selection/bipls_sub_pls.m",364 "sha256": "8156552887f8ec625d36c3309aa64f0d3aabaa58450444bf906d0c4dc2a1965d",365 "language": "MATLAB",366 "lines": 89,367 "truncated": false,368 "block": 14,369 "row": 22453370 },371 {372 "path": "Utilities/Variable Selection/bipls_sub_pls_pre.m",373 "sha256": "985d734b684fe5191fed986546fb9b3acc928fc5f1b6dec6f7b2fdcbe375602b",374 "language": "MATLAB",375 "lines": 22,376 "truncated": false,377 "block": 14,378 "row": 18740379 },380 {381 "path": "Utilities/Variable Selection/bipls_sub_pls_val.m",382 "sha256": "6ffb6d36762ebcbabfea972a74891587ac35c346e4227db776f419d6564e1d18",383 "language": "MATLAB",384 "lines": 252,385 "truncated": false,386 "block": 15,387 "row": 3044388 },389 {390 "path": "Utilities/Variable Selection/rpls_NotPLSToolbox.m",391 "sha256": "6eb644c6939eec2af0249340c1fab47e8d6c71d764cb530d3396b6c75b063b76",392 "language": "MATLAB",393 "lines": 235,394 "truncated": false,395 "block": 15,396 "row": 2994397 },398 {399 "path": "Utilities/Variable Selection/rpls_bipls.m",400 "sha256": "5e0853ec5dd7958ae37c15bd0934591bc52328b6b5174b0e2282cccbb0d779b0",401 "language": "MATLAB",402 "lines": 84,403 "truncated": false,404 "block": 14,405 "row": 23213406 },407 {408 "path": "Utilities/Variable Selection/rpls_cen_std.m",409 "sha256": "6ffe00c381575a0e0d24c0ab9905d5b7654df5bd8f81844766ec0169037e39b6",410 "language": "MATLAB",411 "lines": 92,412 "truncated": false,413 "block": 14,414 "row": 24014415 },416 {417 "path": "Utilities/Variable Selection/rpls_cv.m",418 "sha256": "257a6dfdf1a7e0e245be7c743621a2acbc9a38b4972eddbc22912871dd071aaa",419 "language": "MATLAB",420 "lines": 470,421 "truncated": false,422 "block": 15,423 "row": 4264424 },425 {426 "path": "Utilities/Variable Selection/rpls_cvind.m",427 "sha256": "49560be12b3b93f5d59c7b1d423c386244205736ad643cc7030c99c9d511e125",428 "language": "MATLAB",429 "lines": 154,430 "truncated": false,431 "block": 15,432 "row": 1284433 },434 {435 "path": "Utilities/Variable Selection/rpls_fjernlike.m",436 "sha256": "83f8f1386369b3c01dfc6c6f316255ad8413a459098a79490f1bc04c7721ad50",437 "language": "MATLAB",438 "lines": 133,439 "truncated": false,440 "block": 15,441 "row": 416442 },443 {444 "path": "Utilities/Variable Selection/rpls_msct.m",445 "sha256": "36af9d841add4b141015e8d277a8bfbc919d7208513acd0c168f2ee40a9569b4",446 "language": "MATLAB",447 "lines": 214,448 "truncated": false,449 "block": 15,450 "row": 2518451 },452 {453 "path": "Utilities/Variable Selection/rpls_nanmean.m",454 "sha256": "cb053054409529a9c032e75fef8d34f2c036fb20010e9296e976c08f43aeff64",455 "language": "MATLAB",456 "lines": 41,457 "truncated": false,458 "block": 14,459 "row": 19571460 },461 {462 "path": "Utilities/Variable Selection/rpls_nanstd.m",463 "sha256": "a4e5263f8780fd517689225dbdf3b667a28da3a5ab68d99170fbf0c60904885d",464 "language": "MATLAB",465 "lines": 30,466 "truncated": false,467 "block": 14,468 "row": 19039469 },470 {471 "path": "Utilities/Variable Selection/rpls_nansum.m",472 "sha256": "1527ed71bf090b548c2aec7a978bed7f182e8dd520f00e27f8c3180ff52712c3",473 "language": "MATLAB",474 "lines": 30,475 "truncated": false,476 "block": 14,477 "row": 19154478 },479 {480 "path": "Utilities/Variable Selection/rpls_nanvar.m",481 "sha256": "451562c181616aebfcc27ea7e838353759b03231265cf55d01e6081f2872a7d4",482 "language": "MATLAB",483 "lines": 25,484 "truncated": false,485 "block": 14,486 "row": 18598487 },488 {489 "path": "Utilities/Variable Selection/rpls_plsmiss.m",490 "sha256": "ceb11ae777fdd25dcb78bb2aea7123f8ce1aefeb2dc907ead17efd7f9a4ec9a9",491 "language": "MATLAB",492 "lines": 176,493 "truncated": false,494 "block": 15,495 "row": 1096496 },497 {498 "path": "Utilities/Variable Selection/rpls_plspred.m",499 "sha256": "897f87b8a1fcc4b6424ef3292c2ca72953be89847d4ffb2b873435111ac7943b",500 "language": "MATLAB",501 "lines": 149,502 "truncated": false,503 "block": 15,504 "row": 690505 },506 {507 "path": "Utilities/Variable Selection/rpls_prepro.m",508 "sha256": "9dead4d071b69bafb035f088036803693376f20fb67d66457209417b9d3afd95",509 "language": "MATLAB",510 "lines": 84,511 "truncated": false,512 "block": 14,513 "row": 23496514 },515 {516 "path": "Utilities/Variable Selection/rpls_regres.m",517 "sha256": "44ed7e929caf63fc6a4dd5e8ddad2e6b23c1cb469fc0c5a6f1a36b3d34ac2642",518 "language": "MATLAB",519 "lines": 147,520 "truncated": false,521 "block": 15,522 "row": 1723523 },524 {525 "path": "Utilities/Variable Selection/rpls_repmean.m",526 "sha256": "3331464d34595410041ededea9ca209fd54a16a3a079d3e19f4120e3b1807da4",527 "language": "MATLAB",528 "lines": 61,529 "truncated": false,530 "block": 14,531 "row": 22671532 },533 {534 "path": "Utilities/Variable Selection/rpls_sg.m",535 "sha256": "83dcd0e4e8803d5db5ec7379c61a8b176b29e29292b62bfbf26c4975046cb4ef",536 "language": "MATLAB",537 "lines": 73,538 "truncated": false,539 "block": 14,540 "row": 22861541 },542 {543 "path": "Utilities/Variable Selection/rpls_sgconv.m",544 "sha256": "9ff4e4cba723b1ef01035901974f7164bbf5e0bfd897fd95b2c549091f61c692",545 "language": "MATLAB",546 "lines": 49,547 "truncated": false,548 "block": 14,549 "row": 20466550 },551 {552 "path": "Utilities/Variable Selection/rpls_simpls.m",553 "sha256": "9eed5083b04a93cd130f8476095fc86ce2ae8d15d3d071f6a9ea3b235a77b294",554 "language": "MATLAB",555 "lines": 107,556 "truncated": false,557 "block": 14,558 "row": 24612559 },560 {561 "path": "Utilities/Variable Selection/rpls_statanal.m",562 "sha256": "2cb3e938d0009201426fedea3a1c589dbd0fc1f89033092352f86c5e52d872a9",563 "language": "MATLAB",564 "lines": 266,565 "truncated": false,566 "block": 15,567 "row": 2828568 },569 {570 "path": "Utilities/Variable Selection/rpls_vec.m",571 "sha256": "5406733b8d6f34b006b874f8e84e56b055c010202d32433c097ef426d11bebaa",572 "language": "MATLAB",573 "lines": 6,574 "truncated": false,575 "block": 14,576 "row": 17337577 },578 {579 "path": "Utilities/VariableSelection.m",580 "sha256": "65dab237caf8400ffe7cdf6d10ba1717b15bab5c4a758927ffc3fa900172fdcc",581 "language": "MATLAB",582 "lines": 402,583 "truncated": false,584 "block": 15,585 "row": 4035586 },587 {588 "path": "Utilities/VariableSelectionPlots.m",589 "sha256": "ff4ee5ed478a21b5f4c61ab1b468cfcdbb7bc47b7811e73a38e56f9de556655e",590 "language": "MATLAB",591 "lines": 121,592 "truncated": false,593 "block": 15,594 "row": 1582595 }596 ]597}