Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face

0likes5.6kdownloads

rootmanifests15github.com__rcubero__morphomics.json

github.com__rcubero__morphomics.json264 linesDownload Raw Back to 15

1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/rcubero/morphomics",4 "url": "https://github.com/rcubero/MorphOMICs/tree/v1.0.0",5 "host": "github.com",6 "commit": "cabeb1ef45d48399fe2329569cb303e414730e7a",7 "license": "GPL-3.0",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",14   "language": "License",15   "lines": 674,16   "truncated": false,17   "block": 1,18   "row": 223519  },20  {21   "path": "README.md",22   "sha256": "cf3b4b1ce3d706da543270d13f10bfa8bfbd4bf762d147b890dcbdf2ab45cfdf",23   "language": "Text",24   "lines": 49,25   "truncated": false,26   "block": 8,27   "row": 1001128  },29  {30   "path": "morphomics/Analysis/bootstrapping.py",31   "sha256": "f7bfba6eaecec82c4a3639cc642dfd575c89c9556d63bacface97d08cd9e0f4a",32   "language": "Python",33   "lines": 153,34   "truncated": false,35   "block": 6,36   "row": 4157337  },38  {39   "path": "morphomics/Analysis/mapping.py",40   "sha256": "686a9d05d631a470e1fd1d38752b230f730bb561577c3ed11f4f73a6b989fac9",41   "language": "Python",42   "lines": 57,43   "truncated": false,44   "block": 6,45   "row": 2925346  },47  {48   "path": "morphomics/Analysis/plotting.py",49   "sha256": "8d177f8be914006802c65328ce7545473bc8862c7a391837df6b6b2a565e6511",50   "language": "Python",51   "lines": 369,52   "truncated": false,53   "block": 7,54   "row": 403055  },56  {57   "path": "morphomics/Analysis/reduction.py",58   "sha256": "4cf4954d76a11115c906625a44ee88e2eb44234e29f32061d6799176da025599",59   "language": "Python",60   "lines": 284,61   "truncated": false,62   "block": 7,63   "row": 124164  },65  {66   "path": "morphomics/Neuron/Neuron.py",67   "sha256": "087a10de750cb29af7563eef0dbc3793b469bd58bfcd626e9c6d3e02428a984d",68   "language": "Python",69   "lines": 102,70   "truncated": false,71   "block": 6,72   "row": 3572173  },74  {75   "path": "morphomics/Neuron/__init__.py",76   "sha256": "de65cc1ca4e932f2b99d2915461ccf4d82fffe485a5af7f7917340c747ca5143",77   "language": "Python",78   "lines": 7,79   "truncated": false,80   "block": 6,81   "row": 2076482  },83  {84   "path": "morphomics/Neuron/methods.py",85   "sha256": "655341583661e86d8033b0580f6418dabc1bbcc65e5c466fc8cb48311544867d",86   "language": "Python",87   "lines": 47,88   "truncated": false,89   "block": 6,90   "row": 2496691  },92  {93   "path": "morphomics/Population/Population.py",94   "sha256": "17644bbe10efd01a68c6bec34995d619fe066d0470a3805f58311b3821c18dcf",95   "language": "Python",96   "lines": 56,97   "truncated": false,98   "block": 6,99   "row": 28136100  },101  {102   "path": "morphomics/Population/__init__.py",103   "sha256": "34cebefb5f198405ea93d6c638f642140da295dfac037d09a2dc70842d575189",104   "language": "Python",105   "lines": 7,106   "truncated": false,107   "block": 6,108   "row": 20821109  },110  {111   "path": "morphomics/Soma/Soma.py",112   "sha256": "03b095cd4e0eaf0b5b3a934009448ca827812fbc31e77910d6389e3fb4d48e68",113   "language": "Python",114   "lines": 50,115   "truncated": false,116   "block": 6,117   "row": 29439118  },119  {120   "path": "morphomics/Soma/__init__.py",121   "sha256": "e52d836da0418dac278b8fc9e04552e9eb33b2783d7325c9d18ef119b84e6351",122   "language": "Python",123   "lines": 7,124   "truncated": false,125   "block": 6,126   "row": 20715127  },128  {129   "path": "morphomics/Soma/methods.py",130   "sha256": "28ced0fef7d0c14996109d2fe3d5e1ea18259be83dea544be46c5a5f206ebd96",131   "language": "Python",132   "lines": 30,133   "truncated": false,134   "block": 6,135   "row": 24165136  },137  {138   "path": "morphomics/Topology/__init__.py",139   "sha256": "278440d41ea84b2058f4337c051c1dc9160fb93fef76588bdbbde61bdd0611dc",140   "language": "Python",141   "lines": 3,142   "truncated": false,143   "block": 6,144   "row": 20297145  },146  {147   "path": "morphomics/Topology/analysis.py",148   "sha256": "d9a7477b95532ee85c91b95a68cef5d445fa4e0605bf8a2ba8c301344ae33940",149   "language": "Python",150   "lines": 289,151   "truncated": false,152   "block": 7,153   "row": 2373154  },155  {156   "path": "morphomics/Topology/methods.py",157   "sha256": "d95b4f20c4378bd0659105ed9fe832c29b85b24a7b179b071e547dfca394217a",158   "language": "Python",159   "lines": 294,160   "truncated": false,161   "block": 7,162   "row": 379163  },164  {165   "path": "morphomics/Topology/transformations.py",166   "sha256": "12b62562b04cc10288d9e503bdbe7afa78667675b4afa96d3fd2b64cd82e7b0b",167   "language": "Python",168   "lines": 16,169   "truncated": false,170   "block": 6,171   "row": 22544172  },173  {174   "path": "morphomics/Tree/Tree.py",175   "sha256": "5c5841cc412c77030199b338b12df58dd0cebfc9b7b9bfa341007c3555528102",176   "language": "Python",177   "lines": 134,178   "truncated": false,179   "block": 6,180   "row": 40619181  },182  {183   "path": "morphomics/Tree/__init__.py",184   "sha256": "0dce80cdaa5385cc199738aacdb01818f790bb0c4aa3ff11b9faa8bcd50286b0",185   "language": "Python",186   "lines": 7,187   "truncated": false,188   "block": 6,189   "row": 20709190  },191  {192   "path": "morphomics/Tree/methods.py",193   "sha256": "b51ac8171a72109abf0b34cdb010d71f47534d862b5770f0d74a0c5eba577f69",194   "language": "Python",195   "lines": 338,196   "truncated": false,197   "block": 7,198   "row": 1739199  },200  {201   "path": "morphomics/__init__.py",202   "sha256": "c95d24e06ec348315cb7a9875ce5041ea5c50672e580da40ecb342251d31d6f8",203   "language": "Python",204   "lines": 16,205   "truncated": false,206   "block": 6,207   "row": 22873208  },209  {210   "path": "morphomics/default_parameters.py",211   "sha256": "cdd56186cfd24613f3a2fc50369db6bc683816588c370d6a614b913911ff62f6",212   "language": "Python",213   "lines": 21,214   "truncated": false,215   "block": 6,216   "row": 23721217  },218  {219   "path": "morphomics/io/__init__.py",220   "sha256": "de9d62b2e79b092509811c78729b68ba46280375630ee82bc3f63246d6cd800d",221   "language": "Python",222   "lines": 12,223   "truncated": false,224   "block": 6,225   "row": 21118226  },227  {228   "path": "morphomics/io/io.py",229   "sha256": "9bc4e7768b84df353a8068b0ed47487edaf102acfd59d30527707993b344e86b",230   "language": "Python",231   "lines": 247,232   "truncated": false,233   "block": 6,234   "row": 45300235  },236  {237   "path": "morphomics/io/swc.py",238   "sha256": "696bd86016c6d05947a1872277419ebad57686a784bb06871d1a07fa671bfdb4",239   "language": "Python",240   "lines": 147,241   "truncated": false,242   "block": 6,243   "row": 39791244  },245  {246   "path": "morphomics/utils.py",247   "sha256": "d22d936ffd7542e903afdb21ae6b97d371f87f1fe3bed1866c6b13df28d2ea10",248   "language": "Python",249   "lines": 51,250   "truncated": false,251   "block": 6,252   "row": 27376253  },254  {255   "path": "setup.py",256   "sha256": "1fc40bad2ee70b16d23424d18401285dcd0dadb77d7f2470385bb0dfcab58c41",257   "language": "Python",258   "lines": 41,259   "truncated": false,260   "block": 6,261   "row": 26301262  }263 ]264}