Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__tmurano__repeatedoptogeneticstimulation.json237 linesDownload Raw Back to 22
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/tmurano/repeatedoptogeneticstimulation",4 "url": "https://github.com/tmurano/REPeatedOPtogeneticStimulation",5 "host": "github.com",6 "commit": "91d79a5a47ae112013469f4eca0f79e378f10f18",7 "license": "MIT",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "Extended Fig5c_Forced Swim test/scripts/ForcedSwim.R",13   "sha256": "2b5979053935e5f194a272a484ad63537f52cdb30641869073c9b0116d17ca76",14   "language": "R",15   "lines": 164,16   "truncated": false,17   "block": 8,18   "row": 318319  },20  {21   "path": "Extended Fig6a_Fear Conditioning test/ConditionTest_d0/scripts/ConditioningTest_d0.R",22   "sha256": "c402aca38f95e707d9e16cba8e34b2e6d3f28e0bf12468cb5875675fbefbf6a9",23   "language": "R",24   "lines": 243,25   "truncated": false,26   "block": 8,27   "row": 353028  },29  {30   "path": "Extended Fig6a_Fear Conditioning test/ContextTest_d1/scripts/ContextTest_d1.R",31   "sha256": "c5aefdce6cdcfa98683d335543394a43f124074b6f142eba22cd89fc46346a89",32   "language": "R",33   "lines": 230,34   "truncated": false,35   "block": 8,36   "row": 360337  },38  {39   "path": "Extended Fig6a_Fear Conditioning test/ContextTest_d25/scripts/ContextTest_d25.R",40   "sha256": "7fcbe6e61cf7bcfe0c7bca79e15a7758237541b92865c66cf5ba669bbae1eb19",41   "language": "R",42   "lines": 220,43   "truncated": false,44   "block": 8,45   "row": 357246  },47  {48   "path": "Extended Fig6a_Fear Conditioning test/CuedTest_d1/scripts/CuedTest_d1.R",49   "sha256": "768a25a13c8c15e3d2dea24aa5eb3a876be7e75c620891b403dea88ad9d3a377",50   "language": "R",51   "lines": 216,52   "truncated": false,53   "block": 8,54   "row": 355255  },56  {57   "path": "Extended Fig6a_Fear Conditioning test/CuedTest_d25/scripts/CuedTest_d25.R",58   "sha256": "c955146d5100c3e2813d6d2ae505d71710519b944d381dddea4b1128e57fe276",59   "language": "R",60   "lines": 220,61   "truncated": false,62   "block": 8,63   "row": 357064  },65  {66   "path": "Extended Fig6b_Social Interaction/scripts/SocialInteraction.R",67   "sha256": "588553baac8c60d994b3371e6692846a87ed35c910f2d419dfbf81a5f3151880",68   "language": "R",69   "lines": 158,70   "truncated": false,71   "block": 8,72   "row": 347973  },74  {75   "path": "Extended Fig6b_Social Interaction/scripts/SocialInteraction2.R",76   "sha256": "604fd91ac24796c4dc7449ca4972e37ae44452422024d120c90bb667d73f7f4b",77   "language": "R",78   "lines": 88,79   "truncated": false,80   "block": 8,81   "row": 242982  },83  {84   "path": "Fig1c_RNAseq/scripts/RNAseq.R",85   "sha256": "e667c83cb89d9b59bb2547f46ff81bd6702333653eca1b30da5b644e0611c26e",86   "language": "R",87   "lines": 124,88   "truncated": false,89   "block": 8,90   "row": 242891  },92  {93   "path": "Fig1i_ATACseq/scripts/ATACseq.R",94   "sha256": "cdb4aa73ef7777adc66ee85f011346c33ff091651b61c978b99b1897e7418cd6",95   "language": "R",96   "lines": 118,97   "truncated": false,98   "block": 8,99   "row": 2366100  },101  {102   "path": "Fig3ab_Open Field test/scripts/OpenField.R",103   "sha256": "e4847566b9c417ff7f2f1eecca9ac4261b702f69ae54ab2a502fb1c0d19abff2",104   "language": "R",105   "lines": 109,106   "truncated": false,107   "block": 8,108   "row": 2570109  },110  {111   "path": "Fig3c_Home Cage test/scripts/HomeCage.R",112   "sha256": "7ee2fdbb4a87aaa79fc98262531a5b0593afbed715f0ae568a2d58bd1bdb768a",113   "language": "R",114   "lines": 149,115   "truncated": false,116   "block": 8,117   "row": 2929118  },119  {120   "path": "Fig3d_Tail Suspension test/scripts/TailSuspension.R",121   "sha256": "f8cce6d0c0d69b0e27d1cce4d5a013fcee91afca9584641722717f74c7a4ae37",122   "language": "R",123   "lines": 163,124   "truncated": false,125   "block": 8,126   "row": 3192127  },128  {129   "path": "Fig3e_NSFT/scripts/NSFT.R",130   "sha256": "4f038d4fa26f472ccb8c5ba0bf59d01e458c646b4663d96a8f62f4c7e9d1242d",131   "language": "R",132   "lines": 135,133   "truncated": false,134   "block": 8,135   "row": 2914136  },137  {138   "path": "Fig4_Ca imaging/scripts/Fig4fgh_Position Decoding/all_decoders_Pos.ipynb",139   "sha256": "6d65cff968da993077035e7a82746761c2f4844660ebc8ce82c9bd0fca2e3ec1",140   "language": "Jupyter",141   "lines": 208,142   "truncated": false,143   "block": 5,144   "row": 17112145  },146  {147   "path": "Fig4_Ca imaging/scripts/Fig4fgh_Position Decoding/decoders.py",148   "sha256": "0695200c9b305c4830562cbf1a9dd48cf73c6d5bcc5b8b01d8071eaf7de9583b",149   "language": "Python",150   "lines": 814,151   "truncated": false,152   "block": 7,153   "row": 10397154  },155  {156   "path": "Fig4_Ca imaging/scripts/Fig4fgh_Position Decoding/functions.py",157   "sha256": "ff3135a8e42a19f07a4f65752ecc13eab73732efcefc1d4da443dcca8da4426d",158   "language": "Python",159   "lines": 253,160   "truncated": false,161   "block": 7,162   "row": 2303163  },164  {165   "path": "Fig4_Ca imaging/scripts/Fig4fgh_Position Decoding/utils.py",166   "sha256": "40bb4ec6c26fa40540cfbe1463516036114a2299d6572bb4888406b36a808efa",167   "language": "Python",168   "lines": 50,169   "truncated": false,170   "block": 6,171   "row": 26916172  },173  {174   "path": "Fig4_Ca imaging/scripts/Fig4ijk_Speed Decoding/all_decoders_Sp.ipynb",175   "sha256": "7bccf9373ea12fe5d30bfedd644b6423ce24daaf20f2140f2286277e5590679f",176   "language": "Jupyter",177   "lines": 228,178   "truncated": false,179   "block": 5,180   "row": 17233181  },182  {183   "path": "Fig4_Ca imaging/scripts/Fig4ijk_Speed Decoding/decoders.py",184   "sha256": "0695200c9b305c4830562cbf1a9dd48cf73c6d5bcc5b8b01d8071eaf7de9583b",185   "language": "Python",186   "lines": 814,187   "truncated": false,188   "block": 7,189   "row": 10397190  },191  {192   "path": "Fig4_Ca imaging/scripts/Fig4ijk_Speed Decoding/functions.py",193   "sha256": "027ba9d9a6c9adf4b824f6a5e9aec418dc0a2314788780db1909ff8c4eaf1ee7",194   "language": "Python",195   "lines": 237,196   "truncated": false,197   "block": 7,198   "row": 1645199  },200  {201   "path": "Fig4_Ca imaging/scripts/Fig4ijk_Speed Decoding/utils.py",202   "sha256": "40bb4ec6c26fa40540cfbe1463516036114a2299d6572bb4888406b36a808efa",203   "language": "Python",204   "lines": 50,205   "truncated": false,206   "block": 6,207   "row": 26916208  },209  {210   "path": "Fig5_Open Field test/scripts/OpenField.R",211   "sha256": "16262e213a8ce44c76d75e67bb7a2f876a1b25bdeb2cdf3dbd11b4fd0c5fe005",212   "language": "R",213   "lines": 150,214   "truncated": false,215   "block": 8,216   "row": 3221217  },218  {219   "path": "LICENSE",220   "sha256": "44e3e413efe5db6ace58ec5436ecc4492f24d593e3bd5ec816b7c8b74be52502",221   "language": "License",222   "lines": 21,223   "truncated": false,224   "block": 6,225   "row": 1375226  },227  {228   "path": "README.md",229   "sha256": "66751d89c2b6e7e4732b3e3bc3b534a86696a1529da18c8b9b5c0148ac6e68ff",230   "language": "Text",231   "lines": 24,232   "truncated": false,233   "block": 8,234   "row": 9666235  }236 ]237}