Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__molecularsets__moses.json498 linesDownload Raw Back to 51
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/molecularsets/moses",4 "url": "https://github.com/molecularsets/moses",5 "host": "github.com",6 "commit": "dd7ed6ab38e23afd3ef5371d67939a1760bd8599",7 "license": "MIT",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "9a40669143195de51e7d0ccee88f0d6b4f3d1da91c5a091293e26d128a02d042",14   "language": "License",15   "lines": 7,16   "truncated": false,17   "block": 17,18   "row": 758719  },20  {21   "path": "README.md",22   "sha256": "b0c1af6e4d83cc2e907bdfced9d69a695210266d3a25e3188d78a6c031e1172a",23   "language": "Text",24   "lines": 400,25   "truncated": false,26   "block": 18,27   "row": 1118928  },29  {30   "path": "install_latentgan_dependencies.sh",31   "sha256": "8fa67ad94e9ceef1ee4589838a8f42337a24804dc400a075c0c577627670e2d9",32   "language": "Shell",33   "lines": 12,34   "truncated": false,35   "block": 18,36   "row": 889237  },38  {39   "path": "moses/__init__.py",40   "sha256": "40f8222224a6a640a5698118b9784d2384a526e5e673d7b50c0059f15a5bf018",41   "language": "Python",42   "lines": 9,43   "truncated": false,44   "block": 17,45   "row": 1787546  },47  {48   "path": "moses/aae/__init__.py",49   "sha256": "dada33a4e0076f900ad40175168cf6ceccdb15a98db23ad5014571e2682db466",50   "language": "Python",51   "lines": 5,52   "truncated": false,53   "block": 17,54   "row": 1756855  },56  {57   "path": "moses/aae/config.py",58   "sha256": "bcfd55c627d8d0b8ae173350586b34707407a5dac6b15630286a18e36072c32b",59   "language": "Python",60   "lines": 65,61   "truncated": false,62   "block": 17,63   "row": 2574864  },65  {66   "path": "moses/aae/model.py",67   "sha256": "a9b75407d3ba3f12bd5705a8ca6811295409694d57ab3a5522a5f7a2f61adfe2",68   "language": "Python",69   "lines": 182,70   "truncated": false,71   "block": 17,72   "row": 3036673  },74  {75   "path": "moses/aae/trainer.py",76   "sha256": "6021437f79aa3422debcee624158cb9e0874b5cd0978a5e078fe3519f8df3d11",77   "language": "Python",78   "lines": 285,79   "truncated": false,80   "block": 18,81   "row": 78782  },83  {84   "path": "moses/baselines/__init__.py",85   "sha256": "4eb7964b8421c159c84c9f8f425d96f7c09a86255d45cff769df8d9fff1ef4bc",86   "language": "Python",87   "lines": 6,88   "truncated": false,89   "block": 17,90   "row": 1757991  },92  {93   "path": "moses/baselines/combinatorial.py",94   "sha256": "84c563dcd84838ff4ee3ea547260e8f03a6b48342d35f7e0236a9c23907a4b48",95   "language": "Python",96   "lines": 352,97   "truncated": false,98   "block": 18,99   "row": 655100  },101  {102   "path": "moses/baselines/hmm.py",103   "sha256": "b7c1d5f5bd56582322f10e483b537d989e7b7abc1a19140fc6e4d5a2f6001166",104   "language": "Python",105   "lines": 161,106   "truncated": false,107   "block": 17,108   "row": 28413109  },110  {111   "path": "moses/baselines/ngram.py",112   "sha256": "736f9f8a24f7579f5332771b9716c8d87e724b259c5549d25f8816eb0631341c",113   "language": "Python",114   "lines": 174,115   "truncated": false,116   "block": 17,117   "row": 29716118  },119  {120   "path": "moses/char_rnn/__init__.py",121   "sha256": "6f3441ad6d2f327f8966caf31762f2c83f11d4a8918fc7372f67f971d722bca7",122   "language": "Python",123   "lines": 5,124   "truncated": false,125   "block": 17,126   "row": 17655127  },128  {129   "path": "moses/char_rnn/config.py",130   "sha256": "015da3e751ae073a70c4d13d177fcd013f7736e89d9c525687503e222c242fd3",131   "language": "Python",132   "lines": 39,133   "truncated": false,134   "block": 17,135   "row": 21800136  },137  {138   "path": "moses/char_rnn/model.py",139   "sha256": "9bb8168f5754690fce0eff3a670ad71581b4925f6b3fb92d42e8019e32270488",140   "language": "Python",141   "lines": 99,142   "truncated": false,143   "block": 17,144   "row": 26473145  },146  {147   "path": "moses/char_rnn/trainer.py",148   "sha256": "a6c13310aebd22fefa18d0bfbe0f6d6982098330bbf25f8ca059a6ffafb5d1f9",149   "language": "Python",150   "lines": 119,151   "truncated": false,152   "block": 17,153   "row": 27147154  },155  {156   "path": "moses/dataset/__init__.py",157   "sha256": "1fbe72fcae62ef255d95d195ede10051f353c6b5e334efe84060b7bd6484b701",158   "language": "Python",159   "lines": 4,160   "truncated": false,161   "block": 17,162   "row": 17395163  },164  {165   "path": "moses/dataset/dataset.py",166   "sha256": "a7a68cf828dc98d35e9b22c6193c851b206c1432426a2c396b1acdb6a9fff64a",167   "language": "Python",168   "lines": 38,169   "truncated": false,170   "block": 17,171   "row": 20340172  },173  {174   "path": "moses/interfaces.py",175   "sha256": "0ab65023aba8cf1f4d382c6eca41b85a08c9a6f33bde13524fb9cadfc27e13ac",176   "language": "Python",177   "lines": 34,178   "truncated": false,179   "block": 17,180   "row": 20472181  },182  {183   "path": "moses/latentgan/__init__.py",184   "sha256": "50078bbf158df9148a9f409b0a8bfcf77756b94c5fa6017bd90166bb2af1a948",185   "language": "Python",186   "lines": 5,187   "truncated": false,188   "block": 17,189   "row": 17703190  },191  {192   "path": "moses/latentgan/config.py",193   "sha256": "bde2db23ae84abac11754f822f4e0d9db49e4037594621ab35ef4b6073fbadca",194   "language": "Python",195   "lines": 93,196   "truncated": false,197   "block": 17,198   "row": 28312199  },200  {201   "path": "moses/latentgan/model.py",202   "sha256": "9ee1ad7da791fa89f21324bc6036f03eaf8bed6811d970106dd21ca7f9a5082c",203   "language": "Python",204   "lines": 222,205   "truncated": false,206   "block": 17,207   "row": 30975208  },209  {210   "path": "moses/latentgan/trainer.py",211   "sha256": "bb360472b2a6515b2f6be757df5e49399eb57174669d01100dc411a4a5239320",212   "language": "Python",213   "lines": 253,214   "truncated": false,215   "block": 18,216   "row": 324217  },218  {219   "path": "moses/metrics/NP_Score/npscorer.py",220   "sha256": "f9089c91ad824d7529de443456c87d1126042c2cfa8d32a1a9a83e3ab0677159",221   "language": "Python",222   "lines": 137,223   "truncated": false,224   "block": 17,225   "row": 27907226  },227  {228   "path": "moses/metrics/SA_Score/UnitTestSAScore.py",229   "sha256": "9add48a811937d327978f1593120fd0f7f7995921e73c110fd12947f8c594350",230   "language": "Python",231   "lines": 43,232   "truncated": false,233   "block": 17,234   "row": 20390235  },236  {237   "path": "moses/metrics/SA_Score/sascorer.py",238   "sha256": "ac80f7aef88c42fcf8d8419303f0a00369b643ef2666c0fe6f5c2ddb43c1df67",239   "language": "Python",240   "lines": 177,241   "truncated": false,242   "block": 17,243   "row": 29365244  },245  {246   "path": "moses/metrics/__init__.py",247   "sha256": "dc944f30446986c1b91d649ffb95eea0022d6a5e097820837e5efe77a9d9a4f0",248   "language": "Python",249   "lines": 33,250   "truncated": false,251   "block": 17,252   "row": 20376253  },254  {255   "path": "moses/metrics/metrics.py",256   "sha256": "143dace725619134950d840037b290efd93c045ae1d363ba59bfd051e7cb1ec9",257   "language": "Python",258   "lines": 344,259   "truncated": false,260   "block": 18,261   "row": 1121262  },263  {264   "path": "moses/metrics/utils.py",265   "sha256": "94f1f4a4083d355de819c5e224688ab5f9307f1e16b92083a37e06f638a586a1",266   "language": "Python",267   "lines": 271,268   "truncated": false,269   "block": 17,270   "row": 31836271  },272  {273   "path": "moses/models_storage.py",274   "sha256": "f1da4d9c18a72fa4fc498a6bbea8fe6d93fb44eaa04e339da7ae1ef119e38fed",275   "language": "Python",276   "lines": 34,277   "truncated": false,278   "block": 17,279   "row": 20971280  },281  {282   "path": "moses/organ/__init__.py",283   "sha256": "29f258de26bc615cbf8bd19f050d0f5259c99b569f7c6e47199f42b841c9dc87",284   "language": "Python",285   "lines": 6,286   "truncated": false,287   "block": 17,288   "row": 17858289  },290  {291   "path": "moses/organ/config.py",292   "sha256": "0274d4c2c5641dfb1924d2ef96ba40c2df251c3cb8bea9768dc4fe35be730e4d",293   "language": "Python",294   "lines": 98,295   "truncated": false,296   "block": 17,297   "row": 28251298  },299  {300   "path": "moses/organ/metrics_reward.py",301   "sha256": "265efb36826423cb9324025e9a003ed27fc58a35434a1dcd7a53ce6b8fa87641",302   "language": "Python",303   "lines": 113,304   "truncated": false,305   "block": 17,306   "row": 27305307  },308  {309   "path": "moses/organ/model.py",310   "sha256": "26577324cc19861ccde8a2b3abf7363fef19885ccbbcb54c3e37f3aeee937aa1",311   "language": "Python",312   "lines": 249,313   "truncated": false,314   "block": 17,315   "row": 32288316  },317  {318   "path": "moses/organ/trainer.py",319   "sha256": "07d02f333b98b9d32afbb23ff4665808ebb526612b6df20a975611a705c99c33",320   "language": "Python",321   "lines": 395,322   "truncated": false,323   "block": 18,324   "row": 2209325  },326  {327   "path": "moses/script_utils.py",328   "sha256": "dd7893945da601b2992e4e9e364f9636124de015e2f33d415f603e1a3d99e3ee",329   "language": "Python",330   "lines": 112,331   "truncated": false,332   "block": 17,333   "row": 26878334  },335  {336   "path": "moses/utils.py",337   "sha256": "6edce274b106b3fc6e45c481f171b059f33cd6d3bd6bd08db888e3f60055596f",338   "language": "Python",339   "lines": 316,340   "truncated": false,341   "block": 17,342   "row": 32049343  },344  {345   "path": "moses/vae/__init__.py",346   "sha256": "bc155526cdcc0c184aec4f9e9cace9a482f9180f6c89b62df51091647abba1f5",347   "language": "Python",348   "lines": 5,349   "truncated": false,350   "block": 17,351   "row": 17567352  },353  {354   "path": "moses/vae/config.py",355   "sha256": "bf40df377b09230b241a03615820eb14b6cdbe83e3eb99d48fc382c2ee3db949",356   "language": "Python",357   "lines": 86,358   "truncated": false,359   "block": 17,360   "row": 26753361  },362  {363   "path": "moses/vae/misc.py",364   "sha256": "30fdbd9dc839033e691d3e42e85b644ac2944f9139b4c306e4983d3af13bcddb",365   "language": "Python",366   "lines": 47,367   "truncated": false,368   "block": 17,369   "row": 21426370  },371  {372   "path": "moses/vae/model.py",373   "sha256": "6ce88c8b0bc894ad3b81a541605b86ce1e301510b0cb4b7dc8d342226add4b57",374   "language": "Python",375   "lines": 227,376   "truncated": false,377   "block": 17,378   "row": 31108379  },380  {381   "path": "moses/vae/trainer.py",382   "sha256": "63788e3f936e000a4d6ec71c48dfd392455fc7274b711a3266be100c57bcdc90",383   "language": "Python",384   "lines": 143,385   "truncated": false,386   "block": 17,387   "row": 28522388  },389  {390   "path": "scripts/distribution_plots.py",391   "sha256": "32e0e97c2d2168bc0f03e0e5145c0ea6dc3f1e5dc040af222ad525a3bf5351d5",392   "language": "Python",393   "lines": 86,394   "truncated": false,395   "block": 17,396   "row": 24361397  },398  {399   "path": "scripts/eval.py",400   "sha256": "c2ac3ffaca45149604164d087776b0ca6e44aba580be0ba0bfff104cf9c1be01",401   "language": "Python",402   "lines": 85,403   "truncated": false,404   "block": 17,405   "row": 25341406  },407  {408   "path": "scripts/prepare_dataset.py",409   "sha256": "9d9208a964125ab15240eb300391a0c273eaf020a780e56c5895b481f857c154",410   "language": "Python",411   "lines": 118,412   "truncated": false,413   "block": 17,414   "row": 26046415  },416  {417   "path": "scripts/print_table.py",418   "sha256": "040a8aa43e4ba4ce68f06dc6b7c04c4dd4b1f9193e513b6b11240ec07844c592",419   "language": "Python",420   "lines": 185,421   "truncated": false,422   "block": 17,423   "row": 30425424  },425  {426   "path": "scripts/run.py",427   "sha256": "b8c26c1a964aeeba39fe9577409395c2274ffc5e140dab6cac9c55e7ffc6c80c",428   "language": "Python",429   "lines": 219,430   "truncated": false,431   "block": 17,432   "row": 31188433  },434  {435   "path": "scripts/run_all_models.sh",436   "sha256": "d2034c92f327b68e9ca1f8fa4165bf0811826faeeeea6b3955a568ebfbb66445",437   "language": "Shell",438   "lines": 16,439   "truncated": false,440   "block": 18,441   "row": 9020442  },443  {444   "path": "scripts/sample.py",445   "sha256": "fff17771308b33d33113f8c05eb7aa864a7e2ddd6ef5c272582a85de627e7161",446   "language": "Python",447   "lines": 62,448   "truncated": false,449   "block": 17,450   "row": 22087451  },452  {453   "path": "scripts/split_dataset.py",454   "sha256": "12d933bbae01dbc50ad37ac1ab6dd20ef49a1d1daac8f1c530a94698a00ec706",455   "language": "Python",456   "lines": 104,457   "truncated": false,458   "block": 17,459   "row": 26227460  },461  {462   "path": "scripts/train.py",463   "sha256": "67987d44a553cbd6ea1e34e99b721a8ed807c5827e0a3f1234a4fe5c88238315",464   "language": "Python",465   "lines": 72,466   "truncated": false,467   "block": 17,468   "row": 22757469  },470  {471   "path": "setup.py",472   "sha256": "3035b97162ed40acff285925bf31cd3137798f1f26a062d5e33a94f16f2beedd",473   "language": "Python",474   "lines": 29,475   "truncated": false,476   "block": 17,477   "row": 19864478  },479  {480   "path": "tests/test_baselines.py",481   "sha256": "7943d285c26a671e21f33737805f4e9ecb9eaadd56c7d57847f08e6e0e6941f9",482   "language": "Python",483   "lines": 85,484   "truncated": false,485   "block": 17,486   "row": 24310487  },488  {489   "path": "tests/test_metrics.py",490   "sha256": "6781f981fccfb871853abc2208172ae0533293f8e1aad464fd6af52ac6946c79",491   "language": "Python",492   "lines": 85,493   "truncated": false,494   "block": 17,495   "row": 26234496  }497 ]498}