OpenScientificCodeRegistry/Database
Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.
05.6k
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/hejdmc/pfcmap",4 "url": "https://github.com/hejDMC/pfcmap/",5 "host": "github.com",6 "commit": "9ae52eddc47fbb590ef4e1b1949507334707a0f1",7 "license": "BSD-2-Clause",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11 {12 "path": "LICENSE",13 "sha256": "beeebec59505f45b936c0129cf92fbd6f705cd7c9062b248bbe12010c39e509a",14 "language": "License",15 "lines": 24,16 "truncated": false,17 "block": 11,18 "row": 1430319 },20 {21 "path": "README.md",22 "sha256": "ff315d59592f2a0528ec95e01f046b9d4c4e3b22b9dfc79694c92bb34ba51a96",23 "language": "Text",24 "lines": 97,25 "truncated": false,26 "block": 13,27 "row": 684128 },29 {30 "path": "julia/Fig1c__plot_raster_and_EMG_from_NWB.jl",31 "sha256": "93e5305983172e1b065e1985ad612d702a7f4e24357cd4864f78dcd71c4914c1",32 "language": "Julia",33 "lines": 130,34 "truncated": false,35 "block": 11,36 "row": 1174237 },38 {39 "path": "julia/Fig1f__plot_sliders.jl",40 "sha256": "265418fa158bcdac61a2ad1c619612e1b25842004f0120ea1834488ddfe12756",41 "language": "Julia",42 "lines": 41,43 "truncated": false,44 "block": 11,45 "row": 1162246 },47 {48 "path": "julia/Fig1g__plot_Ww_Nw_example_waveforms.jl",49 "sha256": "4c8b48321b71fac688edd52b4646c92a3d2d6406e8d0f30fd31270671ff47182",50 "language": "Julia",51 "lines": 146,52 "truncated": false,53 "block": 11,54 "row": 1174555 },56 {57 "path": "julia/Fig1h__plot_Ww_Nw_histogram.jl",58 "sha256": "e26ef5795ae5522b16c87357be2568fa208c80d9da742149a1c1deebe85bc071",59 "language": "Julia",60 "lines": 110,61 "truncated": false,62 "block": 11,63 "row": 1170364 },65 {66 "path": "julia/Fig1i__MixModel_Statistics.jl",67 "sha256": "5f68643ed517a9fe0d989893b906e9216fe3d02e7bff6c72af3ef3e65ea990d1",68 "language": "Julia",69 "lines": 160,70 "truncated": false,71 "block": 11,72 "row": 1179073 },74 {75 "path": "julia/Utils/simple_psth.jl",76 "sha256": "dffd4f6aa9031d461da0c7188880b8abe587b8e6280ef7fa0567a36eae6874d9",77 "language": "Julia",78 "lines": 7,79 "truncated": false,80 "block": 11,81 "row": 1158782 },83 {84 "path": "julia/Utils/simple_raster_units.jl",85 "sha256": "bb2e1f81358f6d5f3b85a7e866d16cb5217bc0fada3e3dfa2e54d273a46be07c",86 "language": "Julia",87 "lines": 23,88 "truncated": false,89 "block": 11,90 "row": 1160791 },92 {93 "path": "python/SOM/calc_SOM.py",94 "sha256": "4635112b8f0444d3529e9b1385b159d597072d99a6ffd32bd5d5535cbf11d0c8",95 "language": "Python",96 "lines": 70,97 "truncated": false,98 "block": 12,99 "row": 9499100 },101 {102 "path": "python/SOM/clusterSOM/cluster_SOM.py",103 "sha256": "3854c7480ae0fd6092e7794b28daa919167dda602e0d4ba0f9efd94e5cf9350c",104 "language": "Python",105 "lines": 84,106 "truncated": false,107 "block": 12,108 "row": 9118109 },110 {111 "path": "python/SOM/clusterSOM/clusterplot_SOM.py",112 "sha256": "862f470918bc9a9e747764baee21ab80c0bf5d80bd0efc334a18d8cdc84a76cd",113 "language": "Python",114 "lines": 238,115 "truncated": false,116 "block": 12,117 "row": 16871118 },119 {120 "path": "python/SOM/clusterSOM/clusterplot_SOM_response.py",121 "sha256": "2457c5a3d1b257c3683c83cd6d409a18bd20d4e794f19d4e6952c40e35fcbb72",122 "language": "Python",123 "lines": 222,124 "truncated": false,125 "block": 12,126 "row": 16026127 },128 {129 "path": "python/SOM/clusterSOM/identify_nclust_SOM.py",130 "sha256": "4697e5201816d08a7e50c58adb0fb020c17b62d9052d1eccd59bdc80c84c881a",131 "language": "Python",132 "lines": 142,133 "truncated": false,134 "block": 12,135 "row": 12873136 },137 {138 "path": "python/SOM/clusterSOM/plot_clusterlabels.py",139 "sha256": "a57eed794476eb0e59f2d0d8868c744fcdc5a4900b257ff4e1e6cc839696baac",140 "language": "Python",141 "lines": 225,142 "truncated": false,143 "block": 12,144 "row": 16832145 },146 {147 "path": "python/SOM/clusterSOM/plot_clusterlabels_response.py",148 "sha256": "cdeb004a078ca758c2436dadb2b752000de916de79b7427b63069eb24bf8f6e2",149 "language": "Python",150 "lines": 169,151 "truncated": false,152 "block": 12,153 "row": 14232154 },155 {156 "path": "python/SOM/clusterSOM/plot_psth_and_zeta.py",157 "sha256": "5e6799e7c5cef6a8a35dfd9fdde196d98bd2a2225a2a2f94bf8f47c723a00a1b",158 "language": "Python",159 "lines": 374,160 "truncated": false,161 "block": 12,162 "row": 19139163 },164 {165 "path": "python/SOM/clusterSOM/relabel_clusters.py",166 "sha256": "6dbfb8be71c696bf72cbefc4ca12ad5f5dccccf13fc7401ce2b0ff939868a357",167 "language": "Python",168 "lines": 86,169 "truncated": false,170 "block": 12,171 "row": 10965172 },173 {174 "path": "python/SOM/plot_SOM.py",175 "sha256": "05fcf2bb23d0f1c45557bfdabc7535adf67ef6ebc795eb0ce4498ce928300fa7",176 "language": "Python",177 "lines": 668,178 "truncated": false,179 "block": 12,180 "row": 21336181 },182 {183 "path": "python/SOM/plot_SOM_brain.py",184 "sha256": "fc2fb104fdb9a0c4df09cccd09ced92a067d797fc4adaac8d4755b9e65b1059a",185 "language": "Python",186 "lines": 250,187 "truncated": false,188 "block": 12,189 "row": 17441190 },191 {192 "path": "python/SOM/plot_SOMhits_resolved.py",193 "sha256": "1614b74e585d46eeaa72c6a30de96db0c380f73a62b15e39fc25852a580b110d",194 "language": "Python",195 "lines": 171,196 "truncated": false,197 "block": 12,198 "row": 15623199 },200 {201 "path": "python/SOM/plot_example_imetrics_in_hex.py",202 "sha256": "24c1a29c90e400486b8fb1cf4e70dd01305de280c7d569bdc82020794ecd6a47",203 "language": "Python",204 "lines": 224,205 "truncated": false,206 "block": 12,207 "row": 17025208 },209 {210 "path": "python/callers/call_SOMandplot.py",211 "sha256": "ac913bf6d762d618658133f243207c0df740d289dee8f0c81b3222b597464f44",212 "language": "Python",213 "lines": 36,214 "truncated": false,215 "block": 12,216 "row": 6862217 },218 {219 "path": "python/callers/call_allcompare.py",220 "sha256": "5d9e0b06aeac56ea9511fccfe41e4631327af06784e43658f7305f56e166d1db",221 "language": "Python",222 "lines": 25,223 "truncated": false,224 "block": 12,225 "row": 5168226 },227 {228 "path": "python/callers/call_clusterplot_SOM.py",229 "sha256": "941e7a2a539adfe61be64e3a233c7fa516070dfd5f5cc67a49e780726207764d",230 "language": "Python",231 "lines": 34,232 "truncated": false,233 "block": 12,234 "row": 6142235 },236 {237 "path": "python/callers/call_compare_datasets.py",238 "sha256": "4a0bc28b1c412a83bb3ed19e0acba8221152bb160a5d699dfa2b3eedc3ba1ee8",239 "language": "Python",240 "lines": 28,241 "truncated": false,242 "block": 12,243 "row": 5626244 },245 {246 "path": "python/callers/call_compare_nw_ww.py",247 "sha256": "7d644b41ee20554dc002143e22bb7bef195ed8eaba0def43f7fa842ee575b825",248 "language": "Python",249 "lines": 37,250 "truncated": false,251 "block": 12,252 "row": 6073253 },254 {255 "path": "python/callers/call_connectivity_correlations.py",256 "sha256": "b37eca5fad2ef27d30f9796c3405436f55d9d19c64a7f0bbdbc0d9c98d52e266",257 "language": "Python",258 "lines": 33,259 "truncated": false,260 "block": 12,261 "row": 6303262 },263 {264 "path": "python/callers/call_dataset_description.py",265 "sha256": "d8527f0546b0cead43e5f3ab6a956a2c77eaa8e6d6931e8d4bd00640b9990a8f",266 "language": "Python",267 "lines": 33,268 "truncated": false,269 "block": 12,270 "row": 6213271 },272 {273 "path": "python/callers/call_enrichment_calc_and_plot.py",274 "sha256": "bd23d9aea15eaa72bbdc915a97dc25a3803706fbaa0bc172bde6ebb814992e4b",275 "language": "Python",276 "lines": 34,277 "truncated": false,278 "block": 12,279 "row": 6537280 },281 {282 "path": "python/callers/call_flat_zeta_enrichment_and_hier.py",283 "sha256": "6c9dad4a1a0c3273da768cb6b68e62a7ea543079b2de5c189ef5501dad9c5df2",284 "language": "Python",285 "lines": 26,286 "truncated": false,287 "block": 12,288 "row": 5702289 },290 {291 "path": "python/callers/call_flatmap_counts.py",292 "sha256": "2c29e21498a9fe43fb54cc6e11cebaf81d8e1129517d275f0fc69d47a37dc887",293 "language": "Python",294 "lines": 29,295 "truncated": false,296 "block": 12,297 "row": 5576298 },299 {300 "path": "python/callers/call_flatmap_enrichment_calc_and_plot.py",301 "sha256": "b2a1296318e5dc0f2832bf78dfc5a1ccb80ac896cfa69e8e7cd056043da3f9cf",302 "language": "Python",303 "lines": 37,304 "truncated": false,305 "block": 12,306 "row": 6778307 },308 {309 "path": "python/callers/call_flatmap_enrichment_ds_compare.py",310 "sha256": "f3d03e3b8910f73ae2c1f501b5f4a9e8b6529b504c0488cae9c59bafe9674d6f",311 "language": "Python",312 "lines": 35,313 "truncated": false,314 "block": 12,315 "row": 6376316 },317 {318 "path": "python/callers/call_harriscorr_equalaxes.py",319 "sha256": "df24099e87e7a9aeac906613eb1df4f9797e6cc132770968ac47ca3938b1e654",320 "language": "Python",321 "lines": 22,322 "truncated": false,323 "block": 12,324 "row": 5363325 },326 {327 "path": "python/callers/call_psth_fromtable.py",328 "sha256": "e8979d0398c1d784026d9ed0f83dd5bc658a2a25997b49c089ae79f9379aa3e2",329 "language": "Python",330 "lines": 86,331 "truncated": false,332 "block": 12,333 "row": 9564334 },335 {336 "path": "python/callers/call_psth_plotting.py",337 "sha256": "fa07a043d92c1f9735ef8cf45e0135316de3d1e0c2e3f0e44592cacd83170024",338 "language": "Python",339 "lines": 22,340 "truncated": false,341 "block": 12,342 "row": 5071343 },344 {345 "path": "python/callers/call_quantities_meanvar_fromtable.py",346 "sha256": "ee581e05dd552153a54faeb1b199ae81cbdf2821b23c3ea218e03600ba2418bb",347 "language": "Python",348 "lines": 85,349 "truncated": false,350 "block": 12,351 "row": 10332352 },353 {354 "path": "python/callers/call_quietdetstats.py",355 "sha256": "154fa0f4eb1302c35f31a68d55fae6944502523c0cb5920259c2917c689b3852",356 "language": "Python",357 "lines": 51,358 "truncated": false,359 "block": 12,360 "row": 8351361 },362 {363 "path": "python/callers/call_response_vs_spont.py",364 "sha256": "0a99061ac34ca3799eea924667ebd017d7c564d4ff3a62a109d74e7d27aa8734",365 "language": "Python",366 "lines": 32,367 "truncated": false,368 "block": 12,369 "row": 5879370 },371 {372 "path": "python/callers/call_stability.py",373 "sha256": "c047b83e148e0199e05fee784be4b5262e078ef3939a5b56bb76435bd7e47947",374 "language": "Python",375 "lines": 24,376 "truncated": false,377 "block": 12,378 "row": 5357379 },380 {381 "path": "python/callers/call_zeta_enrichment_getplot.py",382 "sha256": "bb8f00e791d8fe9df94d30b7a2cd8e74756f899bf9e98c23a611d86db704098a",383 "language": "Python",384 "lines": 23,385 "truncated": false,386 "block": 12,387 "row": 5135388 },389 {390 "path": "python/config/config_statedet/paramfuncs_offperiod_det.py",391 "sha256": "4055380750643df53301a0e900769c7179b033b15a5962499ba15c5be5a344de",392 "language": "Python",393 "lines": 83,394 "truncated": false,395 "block": 12,396 "row": 11794397 },398 {399 "path": "python/config/stimplotstyles/association.py",400 "sha256": "28aaf155cde02ac17f7aa2e5fdbdf5ea2463ed9ea45701332488f93fe3137e28",401 "language": "Python",402 "lines": 27,403 "truncated": false,404 "block": 12,405 "row": 7431406 },407 {408 "path": "python/config/stimplotstyles/attention.py",409 "sha256": "56c10a890cb30dadc3ba7d0c4c9292bab33f0a9954365e2e557ba40dc836118b",410 "language": "Python",411 "lines": 78,412 "truncated": false,413 "block": 12,414 "row": 12269415 },416 {417 "path": "python/config/stimplotstyles/aversion.py",418 "sha256": "c95e4dbc210e5665cf7633fa7820e444f02cc61bdb50043e15ff07bab718d441",419 "language": "Python",420 "lines": 45,421 "truncated": false,422 "block": 12,423 "row": 9091424 },425 {426 "path": "python/config/stimplotstyles/context.py",427 "sha256": "03a8942810f334e81daae8356e4a5fc5367c99a0774265d99fd809ce02e7d116",428 "language": "Python",429 "lines": 61,430 "truncated": false,431 "block": 12,432 "row": 11011433 },434 {435 "path": "python/config/stimplotstyles/detection.py",436 "sha256": "0d9b7942386a74177b2e8c2ae88134e12b4a7ccc33620ebd0057339a4e8b1d0a",437 "language": "Python",438 "lines": 43,439 "truncated": false,440 "block": 12,441 "row": 8582442 },443 {444 "path": "python/config/stimplotstyles/opto.py",445 "sha256": "d69b74a766fa8d44e2f4dcf945872afe7d253f1855b8a0a3ed9a0815ba9093fa",446 "language": "Python",447 "lines": 31,448 "truncated": false,449 "block": 12,450 "row": 7343451 },452 {453 "path": "python/config/stimplotstyles/passive.py",454 "sha256": "9420c344ce631d4c66958f07064acbe2ffe34f137b3605f6fc4cb375b1277a23",455 "language": "Python",456 "lines": 49,457 "truncated": false,458 "block": 12,459 "row": 8947460 },461 {462 "path": "python/connectivity_correlations/gao_module_hierarchy.py",463 "sha256": "79832ce1c843d481e2f58f0e09839ace83eab31603125f4879f55694aef548fc",464 "language": "Python",465 "lines": 167,466 "truncated": false,467 "block": 12,468 "row": 15148469 },470 {471 "path": "python/connectivity_correlations/gao_vs_enrichment.py",472 "sha256": "2eae0c1c9ce327b10f51b3874207d23247189b10937e60d2adb8b5f80dd139b8",473 "language": "Python",474 "lines": 384,475 "truncated": false,476 "block": 12,477 "row": 19927478 },479 {480 "path": "python/connectivity_correlations/harris_vs_enrichment.py",481 "sha256": "6bfffc12150d6605cffbe27c0305f12e98b83bbaa28f4b52e17166d31e7aaedf",482 "language": "Python",483 "lines": 623,484 "truncated": false,485 "block": 12,486 "row": 20960487 },488 {489 "path": "python/connectivity_correlations/harris_vs_enrichment_ENHequalaxes.py",490 "sha256": "1aea24d9ee5851d83df2fc4f5e03a39c738ffd409908ca9d1d87bcecfa30ec45",491 "language": "Python",492 "lines": 265,493 "truncated": false,494 "block": 12,495 "row": 17503496 },497 {498 "path": "python/connectivity_correlations/harris_vs_zeta_enrichment.py",499 "sha256": "043720ad9f8c6c43b23168e3a3c6e088a1e6641b32f0979712ae908d2acd179a",500 "language": "Python",501 "lines": 319,502 "truncated": false,503 "block": 12,504 "row": 17867505 },506 {507 "path": "python/connectivity_correlations/harriscorrelation_compare.py",508 "sha256": "8da43c39f68108209d293a59b1bc95c3d9629d2597f931d861c0445e0baedbd6",509 "language": "Python",510 "lines": 118,511 "truncated": false,512 "block": 12,513 "row": 12084514 },515 {516 "path": "python/connectivity_correlations/plot_gao.py",517 "sha256": "6707116f0b49854947c4138c0ad0d3e27c9b5d2af21be27c331f8191399bca3b",518 "language": "Python",519 "lines": 45,520 "truncated": false,521 "block": 12,522 "row": 6934523 },524 {525 "path": "python/dataset_general/feature_correlations.py",526 "sha256": "48f067d3368e5c02f18ef8281c7d8282d505480175478878da4b554a2f27d2be",527 "language": "Python",528 "lines": 157,529 "truncated": false,530 "block": 12,531 "row": 14434532 },533 {534 "path": "python/dataset_general/flatmap_tasks_sampling.py",535 "sha256": "8cc1b96cff756cd7e48cb5ef7660579bdef80e2af18d4f43ee2dfe4057d3a322",536 "language": "Python",537 "lines": 79,538 "truncated": false,539 "block": 12,540 "row": 9474541 },542 {543 "path": "python/dataset_general/parameter_interactions.py",544 "sha256": "fa9d79f256e6021299c8368b210e52a383657265736557bb7e86018b829473ed",545 "language": "Python",546 "lines": 140,547 "truncated": false,548 "block": 12,549 "row": 13906550 },551 {552 "path": "python/dataset_general/quiet_active_featurecontrast.py",553 "sha256": "2b5bc3964c02828215fecec7a7e74a3d7a265018998f74002095b4cfa34c25d1",554 "language": "Python",555 "lines": 251,556 "truncated": false,557 "block": 12,558 "row": 17794559 },560 {561 "path": "python/dataset_general/unit_counts.py",562 "sha256": "4df94fdc9a5dcb55ed3f69693a6f545c735cd4f5face0327d3038b82d8c2688e",563 "language": "Python",564 "lines": 223,565 "truncated": false,566 "block": 12,567 "row": 16857568 },569 {570 "path": "python/enrichments/calc_statsdict.py",571 "sha256": "9b7fd5ecab0f033f553f4348af87e021675aef8c9d801641a2d9849b5c1e41d4",572 "language": "Python",573 "lines": 179,574 "truncated": false,575 "block": 12,576 "row": 15217577 },578 {579 "path": "python/enrichments/calcctrlEnrichments_area_layer_recid.py",580 "sha256": "34e35e14834026d09669ef336d002751a55f470e232bfc5e5dc7c5455294e2f3",581 "language": "Python",582 "lines": 160,583 "truncated": false,584 "block": 12,585 "row": 14211586 },587 {588 "path": "python/enrichments/compare_datasets.py",589 "sha256": "67ee77625c73e4232a836474f49c59b9dadea1b549bba434a67ab1c6d5c418b0",590 "language": "Python",591 "lines": 262,592 "truncated": false,593 "block": 12,594 "row": 17821595 },596 {597 "path": "python/enrichments/compare_nw_ww.py",598 "sha256": "4e6efe8add6d2a459aba37ee0bc6e564b67b521f9767d48919aebcab32821b6e",599 "language": "Python",600 "lines": 150,601 "truncated": false,602 "block": 12,603 "row": 14277604 },605 {606 "path": "python/enrichments/compare_nwwwIBLCarlen.py",607 "sha256": "4d398181d451f13beaeac24d72a7c4d6e1afd8dd0ccbf87269cd8bcb3c10de6e",608 "language": "Python",609 "lines": 188,610 "truncated": false,611 "block": 12,612 "row": 15998613 },614 {615 "path": "python/enrichments/compare_nwwwIBLCarlen_statsmode.py",616 "sha256": "6b1bd1a6304e32e7caa64d55b3b161c85a26307066df1987ac819b44c2cef5d4",617 "language": "Python",618 "lines": 227,619 "truncated": false,620 "block": 12,621 "row": 16931622 },623 {624 "path": "python/enrichments/enrichment_polarization.py",625 "sha256": "6c6274fd59639b4f6968f027a50061b7a75b0f5aeef159d2cba99c959ea97b35",626 "language": "Python",627 "lines": 145,628 "truncated": false,629 "block": 12,630 "row": 13585631 },632 {633 "path": "python/enrichments/explain_shuffling/main_shuffling.py",634 "sha256": "d01bad6cd46910c7979a09c96e49526ecfadbf574c832527cc1af67d39b6885d",635 "language": "Python",636 "lines": 250,637 "truncated": false,638 "block": 12,639 "row": 17932640 },641 {642 "path": "python/enrichments/explain_shuffling/shuffling_helpers.py",643 "sha256": "402db3f5998917c22d97d0190e2423d375228aec11a7a2779911a2625ed3be7c",644 "language": "Python",645 "lines": 265,646 "truncated": false,647 "block": 12,648 "row": 18247649 },650 {651 "path": "python/enrichments/explain_shuffling/task_setups.py",652 "sha256": "fe9a62ddd0e70ff3e9ac6e6f20fc02ed32a68f960fca3a9270c906d7917aef44",653 "language": "Python",654 "lines": 32,655 "truncated": false,656 "block": 12,657 "row": 6449658 },659 {660 "path": "python/enrichments/plot_ctrlEnrichments.py",661 "sha256": "a36e41b81a883cff25396d72137f20bb6616bb238a8ec43d40ec2cd440acaed3",662 "language": "Python",663 "lines": 232,664 "truncated": false,665 "block": 12,666 "row": 16518667 },668 {669 "path": "python/enrichments/plot_enrichments.py",670 "sha256": "444900031d5dca46ff98ff0067269fb881ae97a09d9cbe4b894e45e2cbbe5ebb",671 "language": "Python",672 "lines": 626,673 "truncated": false,674 "block": 12,675 "row": 21970676 },677 {678 "path": "python/enrichments/plot_zeta_responder_enrichment.py",679 "sha256": "07a7a83c5eae3e186e9b9577ca52751453c5f9246995f5747c9fe01efa27008b",680 "language": "Python",681 "lines": 293,682 "truncated": false,683 "block": 12,684 "row": 18475685 },686 {687 "path": "python/enrichments/responseZETA_vs_spont.py",688 "sha256": "56194162ee79e7b9e1dcc7b63263e1a1e74a87c93798addeb303b2c222bf9b9d",689 "language": "Python",690 "lines": 217,691 "truncated": false,692 "block": 12,693 "row": 16402694 },695 {696 "path": "python/enrichments/response_vs_spont.py",697 "sha256": "3ce5898e6b3a03c5e8102cd1139d51dd608b6fdaab624c7c4ee94ac063a98e4c",698 "language": "Python",699 "lines": 173,700 "truncated": false,701 "block": 12,702 "row": 14964703 },704 {705 "path": "python/enrichments/write_enrichment_tables.py",706 "sha256": "7592dc32c46fe1116c7e87facc82f94c2f9e36914873cf439acd103764878642",707 "language": "Python",708 "lines": 286,709 "truncated": false,710 "block": 12,711 "row": 18386712 },713 {714 "path": "python/examples_illustrations/response_examples.py",715 "sha256": "fbff151d923484ad21e47fd13199119dcc84287f3897b5c6f576cd523a431b86",716 "language": "Python",717 "lines": 201,718 "truncated": false,719 "block": 12,720 "row": 15897721 },722 {723 "path": "python/examples_illustrations/spont_raster_examples.py",724 "sha256": "29a436137dd943070af03e142a68fa294c74d71fa4f8c982069f0c5cb978724b",725 "language": "Python",726 "lines": 173,727 "truncated": false,728 "block": 12,729 "row": 15341730 },731 {732 "path": "python/flatmaps/calc_flatmap_statsdict.py",733 "sha256": "cceb46def491899c90bacc9635c59852bc71f3fffaf0e741fc15b0ead6f40864",734 "language": "Python",735 "lines": 157,736 "truncated": false,737 "block": 12,738 "row": 13119739 },740 {741 "path": "python/flatmaps/compare_flatmap_enrichments.py",742 "sha256": "b35d7603ff1c5a39916a8ca264a7ffcf916395cf128aa71cc9fc2613b601ed6a",743 "language": "Python",744 "lines": 403,745 "truncated": false,746 "block": 12,747 "row": 20125748 },749 {750 "path": "python/flatmaps/compare_flatmaps_spont_resp_task.py",751 "sha256": "f112727710c6c1ed920b6fbda70fb69d911440300ced1666051ea0a29f8ec896",752 "language": "Python",753 "lines": 562,754 "truncated": false,755 "block": 12,756 "row": 21903757 },758 {759 "path": "python/flatmaps/flatmap_rasterization.py",760 "sha256": "c3238c702c46d43a9650f5945795b3b0d00ffb9125fc2d17962b634f956669f3",761 "language": "Python",762 "lines": 94,763 "truncated": false,764 "block": 12,765 "row": 11170766 },767 {768 "path": "python/flatmaps/flatmap_tessellation.py",769 "sha256": "c094e4519b1e8ff57ea69b84ba585c7f58f815c1be453f27172c7ad2cbe07121",770 "language": "Python",771 "lines": 277,772 "truncated": false,773 "block": 12,774 "row": 17848775 },776 {777 "path": "python/flatmaps/plot_flat_zeta_responder_and_hierarchy.py",778 "sha256": "de790cbfbeed1c72903af4d296056c246e7420f3045a2fe4262eb4c7b939ab36",779 "language": "Python",780 "lines": 370,781 "truncated": false,782 "block": 12,783 "row": 19389784 },785 {786 "path": "python/flatmaps/plot_flatmap_countstats.py",787 "sha256": "ee933eefad3c6a6a58e0393beb805854340470933c20af494d3eef89f43a071d",788 "language": "Python",789 "lines": 204,790 "truncated": false,791 "block": 12,792 "row": 15539793 },794 {795 "path": "python/flatmaps/plot_flatmap_enrichments.py",796 "sha256": "442704b6e5562f6f46e9937a07aff00605f5eb41961cad9f95747d7121e9be52",797 "language": "Python",798 "lines": 451,799 "truncated": false,800 "block": 12,801 "row": 20722802 },803 {804 "path": "python/flatmaps/write_flatmap_enrichment_tables.py",805 "sha256": "b3edd25c4f8f8eff4b8f9689da791f975efe30c5421fcda8bc8493303090d94b",806 "language": "Python",807 "lines": 253,808 "truncated": false,809 "block": 12,810 "row": 17389811 },812 {813 "path": "python/goalDirectedBehavior_IBL/calc_statsdict_flatmap_tuning.py",814 "sha256": "ceaf3a5eab0c4a2dac732a61c3bfd5f4b7b47e1f21bee66cf74e0f9554a7b6c1",815 "language": "Python",816 "lines": 104,817 "truncated": false,818 "block": 12,819 "row": 11504820 },821 {822 "path": "python/goalDirectedBehavior_IBL/calc_statsdict_gaoRois_tuning.py",823 "sha256": "d3ec7b3b48376ca8409c2c65db121e69ab41d1245f2c37dbc36b92155f40aec3",824 "language": "Python",825 "lines": 103,826 "truncated": false,827 "block": 12,828 "row": 11397829 },830 {831 "path": "python/goalDirectedBehavior_IBL/calc_statsdict_tuning.py",832 "sha256": "c31099948fcfddec78f6f3e503ec0889b652404b115527a9539757e3303bf4be",833 "language": "Python",834 "lines": 149,835 "truncated": false,836 "block": 12,837 "row": 13949838 },839 {840 "path": "python/goalDirectedBehavior_IBL/extract_taskresp.py",841 "sha256": "9be8a368e564b713410200694dfdb4ff18c8407963883e1e786c44230ae7483c",842 "language": "Python",843 "lines": 273,844 "truncated": false,845 "block": 12,846 "row": 18601847 },848 {849 "path": "python/goalDirectedBehavior_IBL/extract_tuning.py",850 "sha256": "14d7a52c144404e387ee52fdf07c6fa33ac21d1e7ffd74977ce330cf2f01a43b",851 "language": "Python",852 "lines": 280,853 "truncated": false,854 "block": 12,855 "row": 19109856 },857 {858 "path": "python/goalDirectedBehavior_IBL/flatmap_tessellationIBL.py",859 "sha256": "bb7d3933ac2dd68db361dd99236164d079ddf593dc5457ce4b30ac0465839147",860 "language": "Python",861 "lines": 260,862 "truncated": false,863 "block": 12,864 "row": 17610865 },866 {867 "path": "python/goalDirectedBehavior_IBL/gao_vs_enrichment_tuning.py",868 "sha256": "69f472ef1d14689189e56b1f6cc4fc787e1c8426184c7adc09f60a370cb18b67",869 "language": "Python",870 "lines": 219,871 "truncated": false,872 "block": 12,873 "row": 16728874 },875 {876 "path": "python/goalDirectedBehavior_IBL/plot_tuning_examples.py",877 "sha256": "0a58befb76bd261ff7baa1f992d8e96eb06be46cea33120e83f56f82dd9a61fa",878 "language": "Python",879 "lines": 221,880 "truncated": false,881 "block": 12,882 "row": 18018883 },884 {885 "path": "python/goalDirectedBehavior_IBL/plot_tuning_flatmaps.py",886 "sha256": "85be9c3695d601ab26b995ca21ba9649efad7e9f2e0029a1d14a79da60c0d5ab",887 "language": "Python",888 "lines": 287,889 "truncated": false,890 "block": 12,891 "row": 18754892 },893 {894 "path": "python/goalDirectedBehavior_IBL/plot_tuning_vs_spont.py",895 "sha256": "460325e62df0466cfdd41baa80efbbe4a0449cf569e53220eaa2aea04da3e0c6",896 "language": "Python",897 "lines": 134,898 "truncated": false,899 "block": 12,900 "row": 13239901 },902 {903 "path": "python/metrics_extraction/response/extract_psth.py",904 "sha256": "ac8e71e7ec938c636d20478d4b11906b47c9f127fe84613c9ebf0593276159d0",905 "language": "Python",906 "lines": 151,907 "truncated": false,908 "block": 12,909 "row": 13647910 },911 {912 "path": "python/metrics_extraction/response/extract_psth_scores.py",913 "sha256": "3128a801c6072830012ed8c2eab53fba68aa36458c406eba489795cbe5ba6377",914 "language": "Python",915 "lines": 216,916 "truncated": false,917 "block": 12,918 "row": 15951919 },920 {921 "path": "python/metrics_extraction/response/extract_psthtimes.py",922 "sha256": "5c9f8ef343f8dfb57a017084311d11b34a0a9e132ee02f3bb0f9eeef5b87a10e",923 "language": "Python",924 "lines": 265,925 "truncated": false,926 "block": 12,927 "row": 17787928 },929 {930 "path": "python/metrics_extraction/spontaneous/extract_IBLpassive_times.py",931 "sha256": "a2f58032c3051443251156395caeedabadd3a22adf2c04953389f187e692b780",932 "language": "Python",933 "lines": 40,934 "truncated": false,935 "block": 12,936 "row": 6398937 },938 {939 "path": "python/metrics_extraction/spontaneous/extract_prepost_quietactive.py",940 "sha256": "0ecf43096c37321469af594100571c8c21eb08ae629ad9763a8e49f718e9efbf",941 "language": "Python",942 "lines": 268,943 "truncated": false,944 "block": 12,945 "row": 17761946 },947 {948 "path": "python/metrics_extraction/spontaneous/extract_quantities_meanvar.py",949 "sha256": "6aa1291c89080fb5e8c47c54179ad7c90d1cf430ed20f4d7f8af62115245302c",950 "language": "Python",951 "lines": 329,952 "truncated": false,953 "block": 12,954 "row": 19235955 },956 {957 "path": "python/metrics_extraction/spontaneous/extract_quantities_meanvar_IBLpassive.py",958 "sha256": "0b5d86f36c506ce1a4685264f6acb3ced0d3f725cb6413e7b86fa0132b6e354f",959 "language": "Python",960 "lines": 129,961 "truncated": false,962 "block": 12,963 "row": 13682964 },965 {966 "path": "python/preprocessing/lick_extraction/call_lickart_detection.py",967 "sha256": "e4b0eae20dde040501a69181b7ccfca2a8571a1fcef0d0fec146e55e7373bfbd",968 "language": "Python",969 "lines": 31,970 "truncated": false,971 "block": 12,972 "row": 6431973 },974 {975 "path": "python/preprocessing/lick_extraction/call_lickdet_piezo.py",976 "sha256": "b64cdbf8893b9fedbc67b3867872f0bd67e9dcf78011c0a3c7cf516f1a80fd26",977 "language": "Python",978 "lines": 18,979 "truncated": false,980 "block": 12,981 "row": 4698982 },983 {984 "path": "python/preprocessing/lick_extraction/lickarts_from_piezo.py",985 "sha256": "669b71e09cbd734d2595418229d8f5582c94593e882292b45751a99d705b7379",986 "language": "Python",987 "lines": 399,988 "truncated": false,989 "block": 12,990 "row": 18902991 },992 {993 "path": "python/preprocessing/lick_extraction/run_lickextraction_fromtrace.py",994 "sha256": "da1f5815f494f75d5b17ac97df65776524b0813c8ac9eaff763a2e4f73a7675b",995 "language": "Python",996 "lines": 636,997 "truncated": false,998 "block": 12,999 "row": 212701000 },1001 {1002 "path": "python/preprocessing/lick_extraction/run_licktrace_icadet.py",1003 "sha256": "da43b317bc5e0fb0109b5382d66cb3e21b90811dd8316ea32223c7a70402a0e3",1004 "language": "Python",1005 "lines": 204,1006 "truncated": false,1007 "block": 12,1008 "row": 155661009 },1010 {1011 "path": "python/preprocessing/quiet_extraction/call_offdetection.py",1012 "sha256": "2647232083c5f848c85998e228ee5d14483a11220ab6a812d29b1fd5cc6edb24",1013 "language": "Python",1014 "lines": 37,1015 "truncated": false,1016 "block": 12,1017 "row": 71081018 },1019 {1020 "path": "python/preprocessing/quiet_extraction/call_transient_from_table.py",1021 "sha256": "f8c89cb3bdf10812601d30ef4af5ac5087429c46aa210888fc47dfa3d8f8e8d1",1022 "language": "Python",1023 "lines": 49,1024 "truncated": false,1025 "block": 12,1026 "row": 78951027 },1028 {1029 "path": "python/preprocessing/quiet_extraction/call_transoffextract_from_table.py",1030 "sha256": "0b31556fa41f8aa37429e074843da4efb3501ed1f330fee14d2772a6fdcaa610",1031 "language": "Python",1032 "lines": 48,1033 "truncated": false,1034 "block": 12,1035 "row": 75931036 },1037 {1038 "path": "python/preprocessing/quiet_extraction/extract_from_off_and_trans.py",1039 "sha256": "6494173beb8d21597342e6807ba940781f1fa7c2a6c1840d63cf82c00e51c964",1040 "language": "Python",1041 "lines": 277,1042 "truncated": false,1043 "block": 12,1044 "row": 181241045 },1046 {1047 "path": "python/preprocessing/quiet_extraction/extract_transients.py",1048 "sha256": "eb04ffe0df46de32394c637219e5e106c2db27356738257bb2ac498f782df0ac",1049 "language": "Python",1050 "lines": 269,1051 "truncated": false,1052 "block": 12,1053 "row": 175351054 },1055 {1056 "path": "python/preprocessing/quiet_extraction/run_offperiod_detection.py",1057 "sha256": "01ef2e809708da3a721697581cb9727b8e9bd7323a840a062e901ff9bb76e4ea",1058 "language": "Python",1059 "lines": 111,1060 "truncated": false,1061 "block": 12,1062 "row": 113311063 },1064 {1065 "path": "python/preprocessing/quiet_extraction/run_offperiod_plotting.py",1066 "sha256": "90df981e332e6b8cf34f74c695419bc4abc4f54dff105e7d1b894f2fb0ca9345",1067 "language": "Python",1068 "lines": 280,1069 "truncated": false,1070 "block": 12,1071 "row": 181381072 },1073 {1074 "path": "python/quiet_active_stats/calc_proportionsExcluded.py",1075 "sha256": "7adac492c22620f8e8eb7d86c8803d43056ba320572d6f9f53d8d9fbbfb6739f",1076 "language": "Python",1077 "lines": 259,1078 "truncated": false,1079 "block": 12,1080 "row": 179131081 },1082 {1083 "path": "python/quiet_active_stats/collect_quiet_stats.py",1084 "sha256": "7c825bfbe07772e4b1170744f85bd24631ae1944568fe43ff48fec6b9767343b",1085 "language": "Python",1086 "lines": 49,1087 "truncated": false,1088 "block": 12,1089 "row": 82071090 },1091 {1092 "path": "python/quiet_active_stats/get_proportionAnd_count_of_quietEpisodes.py",1093 "sha256": "de7da344356504c4d0e105aad31343c1707daeb5a886572755c3af02594e84a8",1094 "language": "Python",1095 "lines": 123,1096 "truncated": false,1097 "block": 12,1098 "row": 125871099 },1100 {1101 "path": "python/quiet_active_stats/nepochs_IBL.py",1102 "sha256": "4b61aabe54755df19ce3afedcf6a484d1cf7f88cd3d626974bfdf59c37a2cd6e",1103 "language": "Python",1104 "lines": 45,1105 "truncated": false,1106 "block": 12,1107 "row": 66261108 },1109 {1110 "path": "python/quiet_active_stats/set_unusable_manually_from_table.py",1111 "sha256": "799c71427234e6632a8751a76976a10560e2f13a975e76c86fc6da4d800cab90",1112 "language": "Python",1113 "lines": 46,1114 "truncated": false,1115 "block": 12,1116 "row": 65551117 },1118 {1119 "path": "python/settings.py",1120 "sha256": "dacfbe751e1a86635eff9c62b25fc48b16552d2170f162146bdfffcaa553d97d",1121 "language": "Python",1122 "lines": 238,1123 "truncated": false,1124 "block": 12,1125 "row": 172781126 },1127 {1128 "path": "python/stability/get_nblocks_nepochs_stats.py",1129 "sha256": "ade311ef49cbddc55329b5ab425c5ee2ea408e931fd2c08da35939670c427cb5",1130 "language": "Python",1131 "lines": 103,1132 "truncated": false,1133 "block": 12,1134 "row": 117991135 },1136 {1137 "path": "python/stability/get_transition_stats_per_rec.py",1138 "sha256": "e5a0935e473d78709c506ae6d9aebd09deb997372e14254f3706534e6326a3cd",1139 "language": "Python",1140 "lines": 212,1141 "truncated": false,1142 "block": 12,1143 "row": 164871144 },1145 {1146 "path": "python/stability/plot_stability.py",1147 "sha256": "be3cd0b48099c095042d09ff86c659140d97107fcb07fc826efcf2666e1bf22b",1148 "language": "Python",1149 "lines": 1089,1150 "truncated": false,1151 "block": 13,1152 "row": 1471153 },1154 {1155 "path": "python/utils/IBLtask_funcs.py",1156 "sha256": "72e0fd69b1abdfcbababd79d370d95b423932e1ded605a8c3977800db3b4ea7e",1157 "language": "Python",1158 "lines": 259,1159 "truncated": false,1160 "block": 12,1161 "row": 183001162 },1163 {1164 "path": "python/utils/accesstools.py",1165 "sha256": "b9f9286227c8f1ebdff720f9712ebf2a1c9c2234e5a6a814cb9c1da489c3abc4",1166 "language": "Python",1167 "lines": 32,1168 "truncated": false,1169 "block": 12,1170 "row": 57811171 },1172 {1173 "path": "python/utils/burst_analyses.py",1174 "sha256": "cf9d2d12eaf3435bb805b2b510876175e22b625bdb2d820e3ab279fecb2bba50",1175 "language": "Python",1176 "lines": 616,1177 "truncated": false,1178 "block": 12,1179 "row": 217991180 },1181 {1182 "path": "python/utils/category_matching.py",1183 "sha256": "16738744d3b5b9d08970193121a4c2ac3fcf6d170565caaf74c752311f95b7b1",1184 "language": "Python",1185 "lines": 302,1186 "truncated": false,1187 "block": 12,1188 "row": 189151189 },1190 {1191 "path": "python/utils/cluster_validation.py",1192 "sha256": "c3e624752d025889e6f41a3bf202144307ee5c1892b781e0b956adcad536491e",1193 "language": "Python",1194 "lines": 150,1195 "truncated": false,1196 "block": 12,1197 "row": 119531198 },1199 {1200 "path": "python/utils/clustering.py",