Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__marbl__winnowmap.json4557 linesDownload Raw Back to 66
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/marbl/winnowmap",4 "url": "https://github.com/marbl/Winnowmap",5 "host": "github.com",6 "commit": "72403b350fafd3aec98d1a6c67123d0d0d1dff7c",7 "license": "MIT",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "0518048710713b7d4054e60d6efe247d07e360834c20543b36dc5f588f6a4e24",14   "language": "License",15   "lines": 63,16   "truncated": false,17   "block": 11,18   "row": 1438019  },20  {21   "path": "README.md",22   "sha256": "952d0aa8822818146eb8a4fcf52b81664ad2242fcd229a9713ceef688c42ceb2",23   "language": "Text",24   "lines": 58,25   "truncated": false,26   "block": 13,27   "row": 672728  },29  {30   "path": "ext/bloom/bloom_filter_example01.cpp",31   "sha256": "bbe4d8e1b7442a158ff9a6ad81b953782a4add86b72928db1f351e26c8bc2735",32   "language": "C++",33   "lines": 115,34   "truncated": false,35   "block": 11,36   "row": 276037  },38  {39   "path": "ext/bloom/bloom_filter_example02.cpp",40   "sha256": "518bee3dedc472877b3e488d3d9f57d41ca5c14ddb0818a848750cfb07c4e5e0",41   "language": "C++",42   "lines": 411,43   "truncated": false,44   "block": 11,45   "row": 402746  },47  {48   "path": "ext/bloom/bloom_filter_example03.cpp",49   "sha256": "24f03645a32340043e095d25a7e1ef2ff44b69dfe5091214b93875c5c743c827",50   "language": "C++",51   "lines": 334,52   "truncated": false,53   "block": 11,54   "row": 389355  },56  {57   "path": "ext/meryl/documentation/source/conf.py",58   "sha256": "1455b7582258dc1dba7edde20eb4a49c9721951a5b8aa9a95bfde4cb7cf87eef",59   "language": "Python",60   "lines": 99,61   "truncated": false,62   "block": 12,63   "row": 1060564  },65  {66   "path": "ext/meryl/scripts/build-initial-canu-repo.sh",67   "sha256": "c9afb98dde0db14a5c2b53a3fcf587172cd0dcb1ab8b76f0335e707035ae5910",68   "language": "Shell",69   "lines": 77,70   "truncated": false,71   "block": 13,72   "row": 545773  },74  {75   "path": "ext/meryl/scripts/build-initial-meryl-repo.sh",76   "sha256": "5e08c9e51c7590407384b068985e018ec12be1e1c88be2f97cd7c9da88d49da7",77   "language": "Shell",78   "lines": 97,79   "truncated": false,80   "block": 13,81   "row": 556982  },83  {84   "path": "ext/meryl/scripts/buildRelease.sh",85   "sha256": "a23c6f478cbd0affe6e1a82b3bd5a7081b35f727f6cc4d14531a291cf50e2695",86   "language": "Shell",87   "lines": 147,88   "truncated": false,89   "block": 13,90   "row": 563691  },92  {93   "path": "ext/meryl/scripts/greedy-assemble-kmers.pl",94   "sha256": "eaa285859b73a627a42ab2ac432deb115e82b92744501d34aa6673e820403331",95   "language": "Perl",96   "lines": 119,97   "truncated": false,98   "block": 12,99   "row": 2939100  },101  {102   "path": "ext/meryl/scripts/merge-meryl-canu.sh",103   "sha256": "2e6086f58ca4bf0ddc507714a66704171cc84f7fdc2a887c62e5b579a8c704da",104   "language": "Shell",105   "lines": 44,106   "truncated": false,107   "block": 13,108   "row": 5095109  },110  {111   "path": "ext/meryl/scripts/statifyOSX.py",112   "sha256": "621a78adfdd0359a5549bd89ed3ec4454a5fb103e6224b02b00e64a8e674b9dd",113   "language": "Python",114   "lines": 181,115   "truncated": false,116   "block": 12,117   "row": 15155118  },119  {120   "path": "ext/meryl/scripts/version_update.pl",121   "sha256": "cd7203534aaa55902a035272701a01e6e7ee25da35d7d0ce4bcc3adfe57291a7",122   "language": "Perl",123   "lines": 251,124   "truncated": false,125   "block": 12,126   "row": 2968127  },128  {129   "path": "ext/meryl/src/meryl-analyze/meryl-analyze.C",130   "sha256": "1601b1aaa7fde74d3a40fadee3ef75a6c8279cfc74febc700b7eba504639136b",131   "language": "C",132   "lines": 383,133   "truncated": false,134   "block": 11,135   "row": 595136  },137  {138   "path": "ext/meryl/src/meryl-import/meryl-import.C",139   "sha256": "3a49fa846861b24b595854dfcfd8889ddf9c6927f3b28ae55484766205841781",140   "language": "C",141   "lines": 257,142   "truncated": false,143   "block": 11,144   "row": 583145  },146  {147   "path": "ext/meryl/src/meryl-lookup/dump.C",148   "sha256": "32f52e11f6b871942daf635004d750a41b71b8257953ca36112fd1647df0b675",149   "language": "C",150   "lines": 443,151   "truncated": false,152   "block": 11,153   "row": 681154  },155  {156   "path": "ext/meryl/src/meryl-lookup/existence.C",157   "sha256": "a837e5d3e0551cf5e3a14e81f11901eaf57814e0a9bce6aa3a199a39b61cbc06",158   "language": "C",159   "lines": 141,160   "truncated": false,161   "block": 11,162   "row": 253163  },164  {165   "path": "ext/meryl/src/meryl-lookup/include-exclude.C",166   "sha256": "26814024c6886a0f927ea922d736fe249d78ff21e280d0ebbb1d3fbace2ec198",167   "language": "C",168   "lines": 155,169   "truncated": false,170   "block": 11,171   "row": 312172  },173  {174   "path": "ext/meryl/src/meryl-lookup/meryl-lookup-help.C",175   "sha256": "3c75e46fc3ed0ad372eb4f34b03e0d6b784d04a79ff7606bbaea6fce1cf0d37f",176   "language": "C",177   "lines": 244,178   "truncated": false,179   "block": 11,180   "row": 642181  },182  {183   "path": "ext/meryl/src/meryl-lookup/meryl-lookup.C",184   "sha256": "a17c5c3db8c6636ee54d101962b1d1744833e5ce33f3abd6cc7f2d2de784caf0",185   "language": "C",186   "lines": 368,187   "truncated": false,188   "block": 11,189   "row": 651190  },191  {192   "path": "ext/meryl/src/meryl-lookup/meryl-lookup.H",193   "sha256": "86c487764ef0338ce8ecd72b22696f87b84e287a6423fae890fda4bec0bfaa31",194   "language": "C/C++",195   "lines": 134,196   "truncated": false,197   "block": 11,198   "row": 6321199  },200  {201   "path": "ext/meryl/src/meryl-lookup/position-lookup.C",202   "sha256": "90556d5ed6063e59b723eeff2cdc88afeecf5fd52d3e61eb092c1960d12fcf00",203   "language": "C",204   "lines": 445,205   "truncated": false,206   "block": 11,207   "row": 671208  },209  {210   "path": "ext/meryl/src/meryl-simple/meryl-simple.C",211   "sha256": "c7569f910b1aa745a81f09e6f2eac48020f6e2f5e6e49e8a9cdfba27a1306767",212   "language": "C",213   "lines": 218,214   "truncated": false,215   "block": 11,216   "row": 423217  },218  {219   "path": "ext/meryl/src/meryl/meryl.C",220   "sha256": "464751a3991d5a70112a2fa548ae00141ecaaa9201d6b3ef38e53c9c00b0ffc4",221   "language": "C",222   "lines": 276,223   "truncated": false,224   "block": 11,225   "row": 689226  },227  {228   "path": "ext/meryl/src/meryl/meryl.H",229   "sha256": "7551584321a87012cc19032b64aa02da9c8322ac55edf9437a02ee003638615c",230   "language": "C/C++",231   "lines": 107,232   "truncated": false,233   "block": 11,234   "row": 6036235  },236  {237   "path": "ext/meryl/src/meryl/merylCommandBuilder.C",238   "sha256": "5b3bc72b9ca28282800e37f5bc9822d251bbcd7a67733742a9899f7830a63af7",239   "language": "C",240   "lines": 706,241   "truncated": false,242   "block": 11,243   "row": 816244  },245  {246   "path": "ext/meryl/src/meryl/merylCountArray.C",247   "sha256": "2c46beacf250f9ff357d847305c2ed7a8a26a1781371249dc13822fca2973efd",248   "language": "C",249   "lines": 880,250   "truncated": false,251   "block": 11,252   "row": 821253  },254  {255   "path": "ext/meryl/src/meryl/merylCountArray.H",256   "sha256": "895923c2e2c45b85a174ac8d0d45a3668ffc5037ca18f5cb8e3f969b85a14c2c",257   "language": "C/C++",258   "lines": 195,259   "truncated": false,260   "block": 11,261   "row": 6809262  },263  {264   "path": "ext/meryl/src/meryl/merylInput.C",265   "sha256": "563bab19114a25339afc1251b93899be16b194e77f2e4c911508c06e76a1317d",266   "language": "C",267   "lines": 271,268   "truncated": false,269   "block": 11,270   "row": 477271  },272  {273   "path": "ext/meryl/src/meryl/merylInput.H",274   "sha256": "dacfbc3e5dac4930fb524f0fa5798b7be77637591be1b9739b1bdc4b56467cec",275   "language": "C/C++",276   "lines": 115,277   "truncated": false,278   "block": 11,279   "row": 6282280  },281  {282   "path": "ext/meryl/src/meryl/merylOp-count.C",283   "sha256": "423d0007f82fa31ebd6c049b215d24ab695f9b52a3a56d3b2b3064be9a6423f5",284   "language": "C",285   "lines": 655,286   "truncated": false,287   "block": 11,288   "row": 856289  },290  {291   "path": "ext/meryl/src/meryl/merylOp-countSimple.C",292   "sha256": "77ca0a2d9bf0eaa16f2b49d7f8baf79fd5534dffe20dbd0e36ba61a88a022b76",293   "language": "C",294   "lines": 262,295   "truncated": false,296   "block": 11,297   "row": 574298  },299  {300   "path": "ext/meryl/src/meryl/merylOp-countThreads.C",301   "sha256": "6c7890ba277c014d0f916ddf639c03160a17de13744b42c061a628cd6df2b073",302   "language": "C",303   "lines": 474,304   "truncated": false,305   "block": 11,306   "row": 731307  },308  {309   "path": "ext/meryl/src/meryl/merylOp-histogram.C",310   "sha256": "aae4d84e3fc0bd56287d378b4c7bf41b27f300a89c06a97cf788bc4b394e8a20",311   "language": "C",312   "lines": 157,313   "truncated": false,314   "block": 11,315   "row": 432316  },317  {318   "path": "ext/meryl/src/meryl/merylOp-nextMer.C",319   "sha256": "f86379d3b1e98685a52cac9d6fb48ad9a464bc83107bfaee59ed0ad4a587ed18",320   "language": "C",321   "lines": 683,322   "truncated": false,323   "block": 11,324   "row": 806325  },326  {327   "path": "ext/meryl/src/meryl/merylOp.C",328   "sha256": "f1c432eb8145755d613cf27fd7c19f1605b728a994307a6057668c8ea883d39e",329   "language": "C",330   "lines": 362,331   "truncated": false,332   "block": 11,333   "row": 617334  },335  {336   "path": "ext/meryl/src/meryl/merylOp.H",337   "sha256": "bcc227f62082e1b8fd9362d7ad1606c7b7b04a2ee7ea0e2bc4d4a3cde8083ff4",338   "language": "C/C++",339   "lines": 297,340   "truncated": false,341   "block": 11,342   "row": 7131343  },344  {345   "path": "ext/meryl/src/meryl2-analyze/meryl-analyze.C",346   "sha256": "0c297bee0d51f61f99ff00dc802914eff8edc41983fe6fc3b57d7949788a2cdc",347   "language": "C",348   "lines": 383,349   "truncated": false,350   "block": 11,351   "row": 594352  },353  {354   "path": "ext/meryl/src/meryl2-import/meryl-import.C",355   "sha256": "c2f83cc0f6438869d57d0eb6be9644c9e6b000119d20f2c4ceda857e1a275ad0",356   "language": "C",357   "lines": 309,358   "truncated": false,359   "block": 11,360   "row": 634361  },362  {363   "path": "ext/meryl/src/meryl2-lookup/dump.C",364   "sha256": "7a5547370cfa9502d92962813c4300a9ac224d0e2c104ce1cdead6c316a65d27",365   "language": "C",366   "lines": 448,367   "truncated": false,368   "block": 11,369   "row": 685370  },371  {372   "path": "ext/meryl/src/meryl2-lookup/existence.C",373   "sha256": "0db4f65d7d50774ab83e769a6615553d71a6b0c933081750b088a801f3be9269",374   "language": "C",375   "lines": 144,376   "truncated": false,377   "block": 11,378   "row": 261379  },380  {381   "path": "ext/meryl/src/meryl2-lookup/include-exclude.C",382   "sha256": "26814024c6886a0f927ea922d736fe249d78ff21e280d0ebbb1d3fbace2ec198",383   "language": "C",384   "lines": 155,385   "truncated": false,386   "block": 11,387   "row": 312388  },389  {390   "path": "ext/meryl/src/meryl2-lookup/meryl-lookup-help.C",391   "sha256": "4083ff2b0cf6094edbef5db7761441d257eff820781e3212bc94daaad0bbf556",392   "language": "C",393   "lines": 242,394   "truncated": false,395   "block": 11,396   "row": 637397  },398  {399   "path": "ext/meryl/src/meryl2-lookup/meryl-lookup.C",400   "sha256": "27d9d3402062a1f43e81eb47be2f0351b65ed6db34c113c33c10120da97893e2",401   "language": "C",402   "lines": 347,403   "truncated": false,404   "block": 11,405   "row": 629406  },407  {408   "path": "ext/meryl/src/meryl2-lookup/meryl-lookup.H",409   "sha256": "e7a07aea843c4d97d47b09586e970dd06fb613807ca99cd22cc18405034f6be0",410   "language": "C/C++",411   "lines": 132,412   "truncated": false,413   "block": 11,414   "row": 6307415  },416  {417   "path": "ext/meryl/src/meryl2-simple/meryl-simple.C",418   "sha256": "f0ac81c16f4a36d01745bc68cf926c9544438c1048757c1f24418bba1a52630e",419   "language": "C",420   "lines": 219,421   "truncated": false,422   "block": 11,423   "row": 424424  },425  {426   "path": "ext/meryl/src/meryl2/matchToken.H",427   "sha256": "e1352b4c02113c49dc660d2edf283a955204f65c35ff4d1a8248a3c9ddfd7d69",428   "language": "C/C++",429   "lines": 70,430   "truncated": false,431   "block": 11,432   "row": 6014433  },434  {435   "path": "ext/meryl/src/meryl2/meryl-usage.H",436   "sha256": "8c347564c78a297ceea7560cfb19723a737959257933855f34722bae37b4623f",437   "language": "C/C++",438   "lines": 106,439   "truncated": false,440   "block": 11,441   "row": 7021442  },443  {444   "path": "ext/meryl/src/meryl2/meryl.C",445   "sha256": "5cd1b2d584431dc3ff944b0488914378d122f27d8115da7b9d98bea9bf4f4e50",446   "language": "C",447   "lines": 253,448   "truncated": false,449   "block": 11,450   "row": 561451  },452  {453   "path": "ext/meryl/src/meryl2/meryl.H",454   "sha256": "87ccff96413bdc3251dd9fe8bd0dd2c68ca1cd62accf0bab78313700d46eb225",455   "language": "C/C++",456   "lines": 54,457   "truncated": false,458   "block": 11,459   "row": 5086460  },461  {462   "path": "ext/meryl/src/meryl2/merylAssign.H",463   "sha256": "3eb1c033ee02f86839768a7c80dd564f072bde1f4ada63fd405e0e423e4ab1bb",464   "language": "C/C++",465   "lines": 133,466   "truncated": false,467   "block": 11,468   "row": 6861469  },470  {471   "path": "ext/meryl/src/meryl2/merylCommandBuilder-isAssign.C",472   "sha256": "18d6638f6b50b3abcb5e7f4de9623c5f86673bb60ea50e3f77a58395827ef321",473   "language": "C",474   "lines": 192,475   "truncated": false,476   "block": 11,477   "row": 668478  },479  {480   "path": "ext/meryl/src/meryl2/merylCommandBuilder-isSelect.C",481   "sha256": "477f2b3ac4f0ebf633be00e0b915923a49b0439e106c3d14df3816e72515d70c",482   "language": "C",483   "lines": 523,484   "truncated": false,485   "block": 11,486   "row": 769487  },488  {489   "path": "ext/meryl/src/meryl2/merylCommandBuilder-printTree.C",490   "sha256": "dfbfd11936072f5861c19ea2baf9e3f8ccf75c96aa52dafa2725a112899501c1",491   "language": "C",492   "lines": 202,493   "truncated": false,494   "block": 11,495   "row": 489496  },497  {498   "path": "ext/meryl/src/meryl2/merylCommandBuilder-processText.C",499   "sha256": "09bec41a2cf1ee6fb87e5d987bb895df09d48044810a5c78a86d5459d37026c7",500   "language": "C",501   "lines": 523,502   "truncated": false,503   "block": 11,504   "row": 813505  },506  {507   "path": "ext/meryl/src/meryl2/merylCommandBuilder-spawnThreads.C",508   "sha256": "b690760d362b18eba370d18d41b22519ae9c8f5c1d442de9d2013900d1713d27",509   "language": "C",510   "lines": 172,511   "truncated": false,512   "block": 11,513   "row": 453514  },515  {516   "path": "ext/meryl/src/meryl2/merylCommandBuilder.C",517   "sha256": "cf442bc65af8e940f09b8411c818b0bcb3c78acfc2d19fac9896cd2af85c637b",518   "language": "C",519   "lines": 257,520   "truncated": false,521   "block": 11,522   "row": 538523  },524  {525   "path": "ext/meryl/src/meryl2/merylCommandBuilder.H",526   "sha256": "9b46615c608bdeff041b76bf50e24a01d7a669597610c35328203842a80e8e9f",527   "language": "C/C++",528   "lines": 222,529   "truncated": false,530   "block": 11,531   "row": 6942532  },533  {534   "path": "ext/meryl/src/meryl2/merylCountArray.C",535   "sha256": "fe56de5f351b2324234d8124cd79517b93b3613ed4b639247fdd1edc864d6f24",536   "language": "C",537   "lines": 890,538   "truncated": false,539   "block": 11,540   "row": 824541  },542  {543   "path": "ext/meryl/src/meryl2/merylCountArray.H",544   "sha256": "e5d4926f605d525a59f615e2922a8717c5c04aca60ec3b799e15d7caadc20eff",545   "language": "C/C++",546   "lines": 200,547   "truncated": false,548   "block": 11,549   "row": 6857550  },551  {552   "path": "ext/meryl/src/meryl2/merylGlobals.C",553   "sha256": "3300ec58f6373849bd65eee38623484778b208e7437d5653f0e7bf977ca1b5ee",554   "language": "C",555   "lines": 138,556   "truncated": false,557   "block": 11,558   "row": 340559  },560  {561   "path": "ext/meryl/src/meryl2/merylGlobals.H",562   "sha256": "193db1d99fb7fac154dc8d9ea0911a20a19089463096b9051af487b10ed5971a",563   "language": "C/C++",564   "lines": 82,565   "truncated": false,566   "block": 11,567   "row": 5831568  },569  {570   "path": "ext/meryl/src/meryl2/merylInput-canu.C",571   "sha256": "61f22a396944aefd22fdacf65b35f07b506a1bccdc3bfdd72d8c9f26ee18516e",572   "language": "C",573   "lines": 118,574   "truncated": false,575   "block": 11,576   "row": 292577  },578  {579   "path": "ext/meryl/src/meryl2/merylInput.C",580   "sha256": "b9d573db0af6816d7f21f0ab57238719ea180525f863a8808cf64c803a3a6a60",581   "language": "C",582   "lines": 216,583   "truncated": false,584   "block": 11,585   "row": 433586  },587  {588   "path": "ext/meryl/src/meryl2/merylInput.H",589   "sha256": "162d3c8b8145cd65261f45b8f4bc7c556246c95e686fb7c0eed836df02965552",590   "language": "C/C++",591   "lines": 226,592   "truncated": false,593   "block": 11,594   "row": 7177595  },596  {597   "path": "ext/meryl/src/meryl2/merylOp-count-memorySize.C",598   "sha256": "cfe72089854f7114761ef1715f9811f02202bdded72fa67c78349b6020015409",599   "language": "C",600   "lines": 89,601   "truncated": false,602   "block": 11,603   "row": 323604  },605  {606   "path": "ext/meryl/src/meryl2/merylOp-count.C",607   "sha256": "09f4715bd7a35f0f958175059463f51ffa193c93cd7abfdf4598b1de2382cc9a",608   "language": "C",609   "lines": 394,610   "truncated": false,611   "block": 11,612   "row": 730613  },614  {615   "path": "ext/meryl/src/meryl2/merylOp-countSequential.C",616   "sha256": "3be169b894fbdffce2899d0828b4402c926e57177f50a8c0fa77f22f19491069",617   "language": "C",618   "lines": 213,619   "truncated": false,620   "block": 11,621   "row": 510622  },623  {624   "path": "ext/meryl/src/meryl2/merylOp-countSimple.C",625   "sha256": "69caf992a7a3fbb3151519b31de770076b3cbe6e1734af6ae6f80325a43e6d8a",626   "language": "C",627   "lines": 261,628   "truncated": false,629   "block": 11,630   "row": 580631  },632  {633   "path": "ext/meryl/src/meryl2/merylOp-countThreads.C",634   "sha256": "13cfd7c2a2a824170949fc42003499fb14c70690c93344828bf181d793fb3eec",635   "language": "C",636   "lines": 486,637   "truncated": false,638   "block": 11,639   "row": 742640  },641  {642   "path": "ext/meryl/src/meryl2/merylOp-nextMer.C",643   "sha256": "e98e89ea83b21fe5e5d7bec5e812c1f993eaeba280b43ec961e778b0dc97ea03",644   "language": "C",645   "lines": 247,646   "truncated": false,647   "block": 11,648   "row": 506649  },650  {651   "path": "ext/meryl/src/meryl2/merylOp.C",652   "sha256": "cf36120b7a26835b34355779159ff3ea4ad9992e7b59ab12919668a4873600cf",653   "language": "C",654   "lines": 26,655   "truncated": false,656   "block": 11,657   "row": 88658  },659  {660   "path": "ext/meryl/src/meryl2/merylOp.H",661   "sha256": "7feb01eec4670c2c70016d8e2c1783230e76780490ca5b1f7a9d4f1cd59168bb",662   "language": "C/C++",663   "lines": 19,664   "truncated": false,665   "block": 11,666   "row": 4745667  },668  {669   "path": "ext/meryl/src/meryl2/merylOpCompute.C",670   "sha256": "00863d8640b158307b07caede3353849a0749294e72be3dbe9b7aba6785d13cf",671   "language": "C",672   "lines": 395,673   "truncated": false,674   "block": 11,675   "row": 636676  },677  {678   "path": "ext/meryl/src/meryl2/merylOpCompute.H",679   "sha256": "55afc60694581f5437e05001d6b5c8dbff26e29c35b39f61c74b4e3811e02d07",680   "language": "C/C++",681   "lines": 141,682   "truncated": false,683   "block": 11,684   "row": 6413685  },686  {687   "path": "ext/meryl/src/meryl2/merylOpCounting.H",688   "sha256": "3dfd8060268b926bab00e0f18d218f340ae6673f6941ddd6eba97b467db01aec",689   "language": "C/C++",690   "lines": 124,691   "truncated": false,692   "block": 11,693   "row": 6391694  },695  {696   "path": "ext/meryl/src/meryl2/merylOpTemplate.C",697   "sha256": "02d11b3015a527a10d3c7b64fb7a785a7d2bc47ae5d9810760fd858f6c8b4953",698   "language": "C",699   "lines": 457,700   "truncated": false,701   "block": 11,702   "row": 765703  },704  {705   "path": "ext/meryl/src/meryl2/merylOpTemplate.H",706   "sha256": "cc3713e2784cda693bafe653b1729690d00e43f180814b30950cb2271537f2dd",707   "language": "C/C++",708   "lines": 226,709   "truncated": false,710   "block": 11,711   "row": 6920712  },713  {714   "path": "ext/meryl/src/meryl2/merylSelector.C",715   "sha256": "f7d2748acfe3ae4e2d81e2ff25828849d3bf1e4d1383b936dcce01fa7126005b",716   "language": "C",717   "lines": 407,718   "truncated": false,719   "block": 11,720   "row": 718721  },722  {723   "path": "ext/meryl/src/meryl2/merylSelector.H",724   "sha256": "17b32ffd493246555b9d0bf63681a8c3e1083bb80721ea679d2a9c37ac4a3a06",725   "language": "C/C++",726   "lines": 273,727   "truncated": false,728   "block": 11,729   "row": 7277730  },731  {732   "path": "ext/meryl/src/tests/matchTokenTest.C",733   "sha256": "af18c0f23e34a6d2267740044c5c0963674d687d15cc00c7501d3cf0b3cfc1af",734   "language": "C",735   "lines": 137,736   "truncated": false,737   "block": 11,738   "row": 525739  },740  {741   "path": "ext/meryl/src/tests/meryl-lookup-test.sh",742   "sha256": "fde692d105d718ce99a40dcebb15b9eece257369ed8b3d4f55f687b7df027938",743   "language": "Shell",744   "lines": 236,745   "truncated": false,746   "block": 13,747   "row": 5792748  },749  {750   "path": "ext/meryl/src/tests/merylCountArrayTest.C",751   "sha256": "6fe01da007039b3ff85b588d56317966206b809bf55948bddaa2138ff116b700",752   "language": "C",753   "lines": 200,754   "truncated": false,755   "block": 11,756   "row": 321757  },758  {759   "path": "ext/meryl/src/tests/merylExactLookupTest.C",760   "sha256": "547f78c6f151052d5dea2847ef89f384eb26acdecbed0204439138fff8e91328",761   "language": "C",762   "lines": 289,763   "truncated": false,764   "block": 11,765   "row": 547766  },767  {768   "path": "ext/meryl/src/tests/test-build.pl",769   "sha256": "2096b96f9771611cf2730b05a39ac135e7380c51c89f5c07e8c06f6ad7d2bef6",770   "language": "Perl",771   "lines": 74,772   "truncated": false,773   "block": 12,774   "row": 2931775  },776  {777   "path": "ext/meryl/src/tests/test-operations.pl",778   "sha256": "6c235df72a27eefce95a199d7f0fca682e5cf93f28378288946658d5afa7aeec",779   "language": "Perl",780   "lines": 372,781   "truncated": false,782   "block": 12,783   "row": 2978784  },785  {786   "path": "ext/meryl/src/utility/scripts/build-initial-repo.sh",787   "sha256": "8b53b7b927ffa7ad5ed2a8c17c31ebf3dcd76e773ffde37416b1ee49396bea6a",788   "language": "Shell",789   "lines": 75,790   "truncated": false,791   "block": 13,792   "row": 5567793  },794  {795   "path": "ext/meryl/src/utility/scripts/build-release.sh",796   "sha256": "028c5fd2b857c3ece4ed6053dc12ce8805e21d8cacff045ccc5c7278c6a441e0",797   "language": "Shell",798   "lines": 280,799   "truncated": false,800   "block": 13,801   "row": 5857802  },803  {804   "path": "ext/meryl/src/utility/src/align.H",805   "sha256": "1ca5d63bf8f628dba556f43f1249ef0fa58506f918b69b7bf0b78285bdb24c79",806   "language": "C/C++",807   "lines": 33,808   "truncated": false,809   "block": 11,810   "row": 4897811  },812  {813   "path": "ext/meryl/src/utility/src/align/align-ksw2-driver.C",814   "sha256": "2acee76027809d08aabec3559de44eabf2d0f261438778881b2a29f597ae2771",815   "language": "C",816   "lines": 326,817   "truncated": false,818   "block": 11,819   "row": 605820  },821  {822   "path": "ext/meryl/src/utility/src/align/align-ksw2-driver.H",823   "sha256": "104a510d7b1df56c52a5b9bfe8e30d2eb8abaf8b652d416c53229bff9543d5a2",824   "language": "C/C++",825   "lines": 133,826   "truncated": false,827   "block": 11,828   "row": 6425829  },830  {831   "path": "ext/meryl/src/utility/src/align/align-ksw2-extz.C",832   "sha256": "4aecd865899231c2308a5c347a8099364349bcf8681e27194dacc15d6eb1ee66",833   "language": "C",834   "lines": 139,835   "truncated": false,836   "block": 11,837   "row": 355838  },839  {840   "path": "ext/meryl/src/utility/src/align/align-ksw2-extz2-sse.C",841   "sha256": "a05584c5e3a8f457c8fc203a297291eb4bae76c8be313bc41e97330a9081728b",842   "language": "C",843   "lines": 311,844   "truncated": false,845   "block": 11,846   "row": 706847  },848  {849   "path": "ext/meryl/src/utility/src/align/align-ksw2.H",850   "sha256": "5c42dc1f2c8a7f032f63fe26aff158ea11697f57427059d7c928dd917624e8d1",851   "language": "C/C++",852   "lines": 178,853   "truncated": false,854   "block": 11,855   "row": 7061856  },857  {858   "path": "ext/meryl/src/utility/src/align/align-parasail-driver.C",859   "sha256": "263c8b8bb4a62ab49364976546a229c8b91d431d07600c80ff2afdff4469f01b",860   "language": "C",861   "lines": 393,862   "truncated": false,863   "block": 11,864   "row": 618865  },866  {867   "path": "ext/meryl/src/utility/src/align/align-parasail-driver.H",868   "sha256": "82294735ff55fe035ad616f2b0632bc4b26537a407d8ff87ecfbda6f90d19477",869   "language": "C/C++",870   "lines": 174,871   "truncated": false,872   "block": 11,873   "row": 6825874  },875  {876   "path": "ext/meryl/src/utility/src/align/align-ssw-driver.C",877   "sha256": "abd788865138556947c7a48f3d17dedfed65f623983aacfc2c1c37463a44faf3",878   "language": "C",879   "lines": 441,880   "truncated": false,881   "block": 11,882   "row": 675883  },884  {885   "path": "ext/meryl/src/utility/src/align/align-ssw-driver.H",886   "sha256": "7ee385b5ad5fb4def4978b6e7b86d775981f36a3b36f91c2e90a516c4551b7dc",887   "language": "C/C++",888   "lines": 144,889   "truncated": false,890   "block": 11,891   "row": 6613892  },893  {894   "path": "ext/meryl/src/utility/src/align/align-ssw.C",895   "sha256": "aebf113e414fa66a42724af0107202cddb680127702bcb8c7de1a610eb3970da",896   "language": "C",897   "lines": 975,898   "truncated": false,899   "block": 11,900   "row": 897901  },902  {903   "path": "ext/meryl/src/utility/src/align/align-ssw.H",904   "sha256": "a474485562313d7c21245b3fc6db86b1618ac75ed258f25e57d6ecf77e650657",905   "language": "C/C++",906   "lines": 202,907   "truncated": false,908   "block": 11,909   "row": 7206910  },911  {912   "path": "ext/meryl/src/utility/src/align/edlib.C",913   "sha256": "d4dc7c0adc75bdd478fc85f2c5e7f7a74303d67ed0d4d87a8575e7b445cec2e5",914   "language": "C",915   "lines": 1638,916   "truncated": false,917   "block": 11,918   "row": 954919  },920  {921   "path": "ext/meryl/src/utility/src/align/edlib.H",922   "sha256": "986de5b5ea5ad695847cc8b963e8fd9ce3b7192a22003b83c5fc2472e4e4c2f9",923   "language": "C/C++",924   "lines": 283,925   "truncated": false,926   "block": 11,927   "row": 7329928  },929  {930   "path": "ext/meryl/src/utility/src/arrays.H",931   "sha256": "a8645bd5d7a11179fe090c4e174721a4cb358e4c311a1ccffe6fe3d586f33514",932   "language": "C/C++",933   "lines": 27,934   "truncated": false,935   "block": 11,936   "row": 4839937  },938  {939   "path": "ext/meryl/src/utility/src/bits.H",940   "sha256": "1c89cdb5a1f8b776be2250f28133a3bf5ca4bf4bc7957fb034bf150a3b64dae0",941   "language": "C/C++",942   "lines": 35,943   "truncated": false,944   "block": 11,945   "row": 4908946  },947  {948   "path": "ext/meryl/src/utility/src/bits/bitArray-v1.H",949   "sha256": "4da5e7fb8d607d60680823289954cc4a71819c4f7991d75dd3f16c5f0364a205",950   "language": "C/C++",951   "lines": 113,952   "truncated": false,953   "block": 11,954   "row": 6021955  },956  {957   "path": "ext/meryl/src/utility/src/bits/bits-v1.H",958   "sha256": "57ef960a6825ac98798d5b0048b79b0feff7ba9e8bdfcd6deb9c4d092893f354",959   "language": "C/C++",960   "lines": 331,961   "truncated": false,962   "block": 11,963   "row": 7247964  },965  {966   "path": "ext/meryl/src/utility/src/bits/fibonacci-v1.C",967   "sha256": "47d39479e61b6495aa69c3a090915590d2b2188bb7be2e0a6cda35eef1e84768",968   "language": "C",969   "lines": 63,970   "truncated": false,971   "block": 11,972   "row": 258973  },974  {975   "path": "ext/meryl/src/utility/src/bits/fibonacci-v1.H",976   "sha256": "a158f2c12ec2162385b742f38d78a7cd70ab604aad82e8562700db7c80db6c6e",977   "language": "C/C++",978   "lines": 38,979   "truncated": false,980   "block": 11,981   "row": 4947982  },983  {984   "path": "ext/meryl/src/utility/src/bits/hexDump-v1.C",985   "sha256": "2af6d3863d4e1406c3957baaa92b43115d0c9eb263169f4be8b82229bb089629",986   "language": "C",987   "lines": 75,988   "truncated": false,989   "block": 11,990   "row": 229991  },992  {993   "path": "ext/meryl/src/utility/src/bits/hexDump-v1.H",994   "sha256": "92904b04221b1ca91de43be09186b09155ce902b4535f7af15fb86b92c319018",995   "language": "C/C++",996   "lines": 41,997   "truncated": false,998   "block": 11,999   "row": 51061000  },1001  {1002   "path": "ext/meryl/src/utility/src/bits/murmur-v1.H",1003   "sha256": "975486c99577f9d789bc261d6ee17da8906142a1e04482cee2084e602545127a",1004   "language": "C/C++",1005   "lines": 120,1006   "truncated": false,1007   "block": 11,1008   "row": 63031009  },1010  {1011   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-binary.C",1012   "sha256": "285bf48f6e4154ea1f42613f42e2166c00912bf1406adccfb03e5199948e46ac",1013   "language": "C",1014   "lines": 163,1015   "truncated": false,1016   "block": 11,1017   "row": 3021018  },1019  {1020   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-bits.C",1021   "sha256": "c1dbd2817f7d14f743740fc7c5eddeb7a94172994a43609714bdaecfcd63ff0a",1022   "language": "C",1023   "lines": 73,1024   "truncated": false,1025   "block": 11,1026   "row": 1351027  },1028  {1029   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-delta.C",1030   "sha256": "02cffc067bdd960b83e014de6bd7dbcace70d56ea558e52e0d1d5ab1a6fe64ce",1031   "language": "C",1032   "lines": 78,1033   "truncated": false,1034   "block": 11,1035   "row": 1431036  },1037  {1038   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-gamma.C",1039   "sha256": "7c9b14a63208864dcbae1c821ebe0d2b2ac542c1fb99c119fdc9629b9768d3ba",1040   "language": "C",1041   "lines": 78,1042   "truncated": false,1043   "block": 11,1044   "row": 1421045  },1046  {1047   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-golomb.C",1048   "sha256": "68d1706083ac19bb0a00b4c3a7945bd5fc2bd0979ad4568eb0ab13c11ea9d8e4",1049   "language": "C",1050   "lines": 29,1051   "truncated": false,1052   "block": 11,1053   "row": 981054  },1055  {1056   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-omega.C",1057   "sha256": "68d1706083ac19bb0a00b4c3a7945bd5fc2bd0979ad4568eb0ab13c11ea9d8e4",1058   "language": "C",1059   "lines": 29,1060   "truncated": false,1061   "block": 11,1062   "row": 981063  },1064  {1065   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-unary.C",1066   "sha256": "3b46e408c8cb72b45f1e1fc2d2b623901045a865283cb349b93fa543c0ea011e",1067   "language": "C",1068   "lines": 176,1069   "truncated": false,1070   "block": 11,1071   "row": 3221072  },1073  {1074   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1-zeckendorf.C",1075   "sha256": "132240cd5b38f19576413230cdbbc3328c97568f9b34ab4dfa797f0f914e47b4",1076   "language": "C",1077   "lines": 175,1078   "truncated": false,1079   "block": 11,1080   "row": 3331081  },1082  {1083   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1.C",1084   "sha256": "903668eeecdaed89d5bf31d9bfbb5b1b0dab991d69403c46504591d7dffe0818",1085   "language": "C",1086   "lines": 289,1087   "truncated": false,1088   "block": 11,1089   "row": 5391090  },1091  {1092   "path": "ext/meryl/src/utility/src/bits/stuffedBits-v1.H",1093   "sha256": "a7e499230afdbe2a524dea7a1013cfd3eba9522f2f2aa7af00a10eb55aa96c78",1094   "language": "C/C++",1095   "lines": 399,1096   "truncated": false,1097   "block": 11,1098   "row": 73921099  },1100  {1101   "path": "ext/meryl/src/utility/src/bits/wordArray-v1.C",1102   "sha256": "6f24fc97dbb28852681567dd307bf34ad8bbbc54b992bb89dd97d4406095912f",1103   "language": "C",1104   "lines": 287,1105   "truncated": false,1106   "block": 11,1107   "row": 5761108  },1109  {1110   "path": "ext/meryl/src/utility/src/bits/wordArray-v1.H",1111   "sha256": "225fba3ca7c005a2b66bde6028cc0795f256c9a6e316acdbf024f35f6a0a4ec4",1112   "language": "C/C++",1113   "lines": 152,1114   "truncated": false,1115   "block": 11,1116   "row": 65881117  },1118  {1119   "path": "ext/meryl/src/utility/src/datastructures/arrays-v1.H",1120   "sha256": "bd9303b20332dd83af4c4090963b8fc0c3ae7e5f7787c9bb453bb19c052b02ee",1121   "language": "C/C++",1122   "lines": 396,1123   "truncated": false,1124   "block": 11,1125   "row": 73171126  },1127  {1128   "path": "ext/meryl/src/utility/src/datastructures/intervalList-v1.H",1129   "sha256": "1b8bfa0a65b870102f8b9eea5dd9244a203ade4ad5f18d6382d4740273576333",1130   "language": "C/C++",1131   "lines": 403,1132   "truncated": false,1133   "block": 11,1134   "row": 72691135  },1136  {1137   "path": "ext/meryl/src/utility/src/datastructures/intervals-v1.H",1138   "sha256": "4ad408f5548b7bb1e497564399da1719b2b45ea4c703069223553f99d353e193",1139   "language": "C/C++",1140   "lines": 615,1141   "truncated": false,1142   "block": 11,1143   "row": 75781144  },1145  {1146   "path": "ext/meryl/src/utility/src/datastructures/keyAndValue-v1.C",1147   "sha256": "52ec3f244f43b9a59e0b6baecfca8cb0523b80652de2f62a47f090b7e94b8f7d",1148   "language": "C",1149   "lines": 136,1150   "truncated": false,1151   "block": 11,1152   "row": 2941153  },1154  {1155   "path": "ext/meryl/src/utility/src/datastructures/keyAndValue-v1.H",1156   "sha256": "aabcf4e79ce40b34ecf88081a874df9f5f725edbc317772f814939d0d8972a06",1157   "language": "C/C++",1158   "lines": 63,1159   "truncated": false,1160   "block": 11,1161   "row": 54361162  },1163  {1164   "path": "ext/meryl/src/utility/src/datastructures/regex-v1.C",1165   "sha256": "c2e8698563278a9c84cbd9e9f23b72697a9b695ecee1d9f8986a068fe4e92cbd",1166   "language": "C",1167   "lines": 151,1168   "truncated": false,1169   "block": 11,1170   "row": 3561171  },1172  {1173   "path": "ext/meryl/src/utility/src/datastructures/regex-v1.H",1174   "sha256": "e7870ed54265e3d68f85bcbe4b46fed46c65771304cf92848cdddefe9cfe8aed",1175   "language": "C/C++",1176   "lines": 76,1177   "truncated": false,1178   "block": 11,1179   "row": 58381180  },1181  {1182   "path": "ext/meryl/src/utility/src/datastructures/regex-v2-build.C",1183   "sha256": "a9fd40871e1b10424fa2a325d2d8aec21ca1afc98dc2e56f4c0c98cb333edcb7",1184   "language": "C",1185   "lines": 419,1186   "truncated": false,1187   "block": 11,1188   "row": 6991189  },1190  {1191   "path": "ext/meryl/src/utility/src/datastructures/regex-v2-convert.C",1192   "sha256": "13fc32878d2ef073284aa7743a0990eed83a7942cd7006f6595f6e144b7c3b19",1193   "language": "C",1194   "lines": 119,1195   "truncated": false,1196   "block": 11,1197   "row": 3071198  },1199  {1200   "path": "ext/meryl/src/utility/src/datastructures/regex-v2-match.C",

Showing the first 1,200 of 4557 lines. Download the file for the rest.