Datasetpublic
OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.
sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
rootmanifests67github.com__yuelongwu__feabas.json
github.com__yuelongwu__feabas.json327 linesDownload Raw Back to 67
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/yuelongwu/feabas",4 "url": "https://github.com/YuelongWu/feabas",5 "host": "github.com",6 "commit": "605e6597a834d0a2e82cd331b94d3b4f876c62a9",7 "license": "MIT",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "e3ae61a71567dacb8d8e8f257cc8e5f5633f155b8f14a1bf9d7dd335e6a6cc0c",14   "language": "License",15   "lines": 21,16   "truncated": false,17   "block": 9,18   "row": 286119  },20  {21   "path": "README.md",22   "sha256": "962a4ef601c25298526162f0f95ae6f11b0833b0de658be3656e01435fb733df",23   "language": "Text",24   "lines": 348,25   "truncated": false,26   "block": 9,27   "row": 1474728  },29  {30   "path": "feabas/__init__.py",31   "sha256": "c52e4bd3361e308c63e32ab5d64dd0adbfee8c8d663ef0a700a2d5869f6a245e",32   "language": "Python",33   "lines": 1,34   "truncated": false,35   "block": 9,36   "row": 609537  },38  {39   "path": "feabas/aligner.py",40   "sha256": "a7c00ba32bce16c5b45273388a41b01f0201be7e88fdd7f2b66e61542e2cefd8",41   "language": "Python",42   "lines": 1637,43   "truncated": false,44   "block": 9,45   "row": 1260846  },47  {48   "path": "feabas/caching.py",49   "sha256": "9306256b3b4f07585943e60614f2181b5efd595d09891951d1c7814de6da671c",50   "language": "Python",51   "lines": 596,52   "truncated": false,53   "block": 9,54   "row": 1160955  },56  {57   "path": "feabas/common.py",58   "sha256": "de3abee0f9735c4164c736c76951da2282297aca3de01b2c3170be0b5b2fb068",59   "language": "Python",60   "lines": 896,61   "truncated": false,62   "block": 9,63   "row": 1231464  },65  {66   "path": "feabas/concurrent.py",67   "sha256": "873e23de320dbb3e1ceae97563d87bd7acec4f11154de0ccc6db44aa92d46c07",68   "language": "Python",69   "lines": 217,70   "truncated": false,71   "block": 9,72   "row": 1053373  },74  {75   "path": "feabas/config.py",76   "sha256": "b6e3d7c87927a4b17ae37fa893225667ad260b60f938e3b960d831e134a59057",77   "language": "Python",78   "lines": 310,79   "truncated": false,80   "block": 9,81   "row": 1089582  },83  {84   "path": "feabas/constant.py",85   "sha256": "ade2c5c39c03ce6c81fa6ddb7eb97821ec8a270f61caaae7ee0bfa257fb07840",86   "language": "Python",87   "lines": 45,88   "truncated": false,89   "block": 9,90   "row": 764291  },92  {93   "path": "feabas/dal.py",94   "sha256": "7086daea6f3955b2029cff5cef5287a1c11d498e357e60b803d76079a94798be",95   "language": "Python",96   "lines": 1558,97   "truncated": false,98   "block": 9,99   "row": 12549100  },101  {102   "path": "feabas/logging.py",103   "sha256": "8ff2ee263d03f36a1483a55af3d06c9fcce7ba2d7f292bdeeb2c37fb84cc807a",104   "language": "Python",105   "lines": 151,106   "truncated": false,107   "block": 9,108   "row": 9576109  },110  {111   "path": "feabas/matcher.py",112   "sha256": "45e56768cc27b084429dcf3eec198106ef795c85b9e87169f14b54ba90c92542",113   "language": "Python",114   "lines": 1058,115   "truncated": false,116   "block": 9,117   "row": 12490118  },119  {120   "path": "feabas/material.py",121   "sha256": "439aed2d1e01974cb7b1d557af3409723bfcfd4363daff7269a4b5e562f42ba4",122   "language": "Python",123   "lines": 551,124   "truncated": false,125   "block": 9,126   "row": 11901127  },128  {129   "path": "feabas/mesh.py",130   "sha256": "30d7e96cb4d5351a992697f5209085b1d03eff28720e5ba5f0316198511fda5c",131   "language": "Python",132   "lines": 3409,133   "truncated": false,134   "block": 9,135   "row": 12680136  },137  {138   "path": "feabas/mipmap.py",139   "sha256": "20541b1c1c7931b41d6e81c2773db821006be75c569ba97dbcf266376e23a083",140   "language": "Python",141   "lines": 674,142   "truncated": false,143   "block": 9,144   "row": 12211145  },146  {147   "path": "feabas/multisem.py",148   "sha256": "fa8f307b0db4fddc426ff955672bbb0330c95a22ae3d9c09e0ec11af8e2b21e2",149   "language": "Python",150   "lines": 227,151   "truncated": false,152   "block": 9,153   "row": 10582154  },155  {156   "path": "feabas/optimizer.py",157   "sha256": "a9cd099fd342c3d9f0b280aa062fb3899c2565eef37697a7dd1a152cffdbb10f",158   "language": "Python",159   "lines": 2190,160   "truncated": false,161   "block": 9,162   "row": 12641163  },164  {165   "path": "feabas/renderer.py",166   "sha256": "84313f4f95ee173e22c700cbf3ee1ff476694ea9f622be3417d0ec16657accac",167   "language": "Python",168   "lines": 1469,169   "truncated": false,170   "block": 9,171   "row": 12570172  },173  {174   "path": "feabas/spatial.py",175   "sha256": "9cb3cacb0fcdb3b8418cded5588d1449ac376b08b2d9df49916ce42975d31f64",176   "language": "Python",177   "lines": 1358,178   "truncated": false,179   "block": 9,180   "row": 12528181  },182  {183   "path": "feabas/stitcher.py",184   "sha256": "49607c6bcb24ae1ff901e12bac7aff91737962c20e9592deca4a4ff333f1e190",185   "language": "Python",186   "lines": 2046,187   "truncated": false,188   "block": 9,189   "row": 12644190  },191  {192   "path": "feabas/storage.py",193   "sha256": "c40c99dc17c87ba89109d74e30b753797ef07342cd27c7b8b084d870f1cf0f49",194   "language": "Python",195   "lines": 202,196   "truncated": false,197   "block": 9,198   "row": 9811199  },200  {201   "path": "feabas/thumbnail.py",202   "sha256": "ac4677356e95a26bbd34543245a43f9747832102344e1d257a03caca78f27145",203   "language": "Python",204   "lines": 933,205   "truncated": false,206   "block": 9,207   "row": 12364208  },209  {210   "path": "feabas/visualization.py",211   "sha256": "b6547b099a4ac0da6cff1b72c1db80971f5f9f0560119798164dbdf0dfa7ca49",212   "language": "Python",213   "lines": 269,214   "truncated": false,215   "block": 9,216   "row": 10747217  },218  {219   "path": "scripts/align_main.py",220   "sha256": "c8f025c0be96d023a3e0a65609e703014986e23bb9f6a60f8791489447e82236",221   "language": "Python",222   "lines": 629,223   "truncated": false,224   "block": 9,225   "row": 12292226  },227  {228   "path": "scripts/stitch_main.py",229   "sha256": "1d2a8540629aecfe4b55e4136e958c3ae9400a65ea9a6dbe18cab5b0ef047544",230   "language": "Python",231   "lines": 301,232   "truncated": false,233   "block": 9,234   "row": 11361235  },236  {237   "path": "scripts/thumbnail_main.py",238   "sha256": "6083df1e94c8c57e717b35a60880286ff1838ad36ef6215cb4008ac96b85a436",239   "language": "Python",240   "lines": 666,241   "truncated": false,242   "block": 9,243   "row": 12320244  },245  {246   "path": "setup.py",247   "sha256": "5a7c770850f2a9afad161e4caf272456279e0e1e72d0c9d72c21c7d91e2e841d",248   "language": "Python",249   "lines": 52,250   "truncated": false,251   "block": 9,252   "row": 7323253  },254  {255   "path": "tools/compute_alignment_residues.py",256   "sha256": "9c331ff47a167c5ff3065a6569202e459637b507341d3056dcb9ee0a33755078",257   "language": "Python",258   "lines": 76,259   "truncated": false,260   "block": 9,261   "row": 8753262  },263  {264   "path": "tools/convert_manual_thumbnail_matches.py",265   "sha256": "6aabbb7f1ac0aad531e7171f2ec4db613c5b59fa291669ec6472b10127ac783f",266   "language": "Python",267   "lines": 43,268   "truncated": false,269   "block": 9,270   "row": 7659271  },272  {273   "path": "tools/export_match_to_bigwarp_csv.py",274   "sha256": "fbaf15f63deebb9f9a00753ffa7e9361c31f5bbd59120d247208a2c90bf535aa",275   "language": "Python",276   "lines": 61,277   "truncated": false,278   "block": 9,279   "row": 8189280  },281  {282   "path": "tools/merge_manual_match.py",283   "sha256": "c8bc309944c4c987380ae044034a4e1381e8f61f55ab2444be8a24e7a707f021",284   "language": "Python",285   "lines": 65,286   "truncated": false,287   "block": 9,288   "row": 8227289  },290  {291   "path": "tools/normalize_aligned_meshes.py",292   "sha256": "3cb0942b1228cb1652e09c31cd1b18171f2722f0842954459d4743344b614afc",293   "language": "Python",294   "lines": 87,295   "truncated": false,296   "block": 9,297   "row": 8706298  },299  {300   "path": "tools/render_aligned_thumbnails.py",301   "sha256": "62fc91076216fc3881d9a725b5f098583906b382dba493dde0afef72fb2447d5",302   "language": "Python",303   "lines": 140,304   "truncated": false,305   "block": 9,306   "row": 9698307  },308  {309   "path": "tools/split_wrinkles.py",310   "sha256": "71150c5fc8bc210d251f0442cbf2a7a84e046f38862e5f5fadd674717bf84ca7",311   "language": "Python",312   "lines": 53,313   "truncated": false,314   "block": 9,315   "row": 7954316  },317  {318   "path": "tools/visualize_align_match_coverage.py",319   "sha256": "3b40c6cacbf15fbfb7e81b4b0b537358de86959d004ffd23949f82beb901bc22",320   "language": "Python",321   "lines": 165,322   "truncated": false,323   "block": 9,324   "row": 10266325  }326 ]327}