Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__labgas__labgascore.json1470 linesDownload Raw Back to af
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/labgas/labgascore",4 "url": "https://github.com/labgas/LaBGAScore/tree/main/pet/scripts",5 "host": "github.com",6 "commit": "75a8bc9e5bc708c2d5ca78efd2c05602220140b2",7 "license": "GPL-3.0",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",14   "language": "License",15   "lines": 674,16   "truncated": false,17   "block": 1,18   "row": 223519  },20  {21   "path": "README.md",22   "sha256": "5c4bd6befec5b726ede0b2227a3e7117043ba6d8150df77e36931cf61a86aae0",23   "language": "Text",24   "lines": 342,25   "truncated": false,26   "block": 4,27   "row": 274428  },29  {30   "path": "atlas_mask_tools/LaBGAScore_atlas_binary_mask_from_atlas.m",31   "sha256": "502a5b1f068c5538a0bbcae5fd136a71dff7d524eee98862e639b4ea625e94d5",32   "language": "MATLAB",33   "lines": 261,34   "truncated": false,35   "block": 3,36   "row": 1604137  },38  {39   "path": "atlas_mask_tools/LaBGAScore_atlas_rois_from_atlas.m",40   "sha256": "c340d206c73f04f9a06bf48b07df10ef0d952015e5d5e4f918c524b368c2170d",41   "language": "MATLAB",42   "lines": 434,43   "truncated": false,44   "block": 3,45   "row": 1666546  },47  {48   "path": "clean/LaBGAScore_check_all_scripts.m",49   "sha256": "b1371620776f59295624a9e2f8f16e451034a399e1a70a8ed5cacecee96ca8e3",50   "language": "MATLAB",51   "lines": 114,52   "truncated": false,53   "block": 3,54   "row": 1408855  },56  {57   "path": "clean/LaBGAScore_check_display.m",58   "sha256": "b5f83781e5ab657d1d3e3a50701f03cb29dde33e8ed1162e7037acda4f9af417",59   "language": "MATLAB",60   "lines": 200,61   "truncated": false,62   "block": 3,63   "row": 1583064  },65  {66   "path": "clean/LaBGAScore_clean_gzip_all_nii.m",67   "sha256": "630b266dc3389b178a75db7d51cb7282f919d856d1d8485df588aa67ba481516",68   "language": "MATLAB",69   "lines": 83,70   "truncated": false,71   "block": 3,72   "row": 1184573  },74  {75   "path": "clean/LaBGAScore_clean_sourcedata.m",76   "sha256": "60ec60c563d5431cba68e7a29b0c09f64408b1a29cf6005de7beb1d70c0288c4",77   "language": "MATLAB",78   "lines": 34,79   "truncated": false,80   "block": 3,81   "row": 1045982  },83  {84   "path": "clean/LaBGAScore_dep_build_index.m",85   "sha256": "a8d104264b2816ce6810b7c8f636ed3cfc006809bf77ea084d28470d89cf21c8",86   "language": "MATLAB",87   "lines": 319,88   "truncated": false,89   "block": 3,90   "row": 1625291  },92  {93   "path": "clean/LaBGAScore_dep_map.m",94   "sha256": "dc7aa31525c9070388c477dace5de8f3510eea12b3b3a61744799cd9067fa2a2",95   "language": "MATLAB",96   "lines": 682,97   "truncated": false,98   "block": 3,99   "row": 16991100  },101  {102   "path": "clean/LaBGAScore_dep_report.m",103   "sha256": "cf74f26bc9c99424054e0442a86ceff2679db2753298bc3412a833917c627677",104   "language": "MATLAB",105   "lines": 368,106   "truncated": false,107   "block": 3,108   "row": 16466109  },110  {111   "path": "clean/LaBGAScore_move_repos_matlabpath.m",112   "sha256": "9075b2b9d83b664cca5946126b7280259a4feddaa9b0556347c3e529c3640779",113   "language": "MATLAB",114   "lines": 21,115   "truncated": false,116   "block": 3,117   "row": 8741118  },119  {120   "path": "clean/LaBGAScore_prov_gitinfo.m",121   "sha256": "d26a90b870c0d01592885fed43ce4848211e1483a182cececc7ebee415322476",122   "language": "MATLAB",123   "lines": 259,124   "truncated": false,125   "block": 3,126   "row": 15682127  },128  {129   "path": "clean/LaBGAScore_prov_gitstatus.m",130   "sha256": "1092d283b5e0f40c61a8a928289838802587b4369857f137cf77beffaa0fb71b",131   "language": "MATLAB",132   "lines": 268,133   "truncated": false,134   "block": 3,135   "row": 15663136  },137  {138   "path": "clean/LaBGAScore_prov_protect_reflogs.m",139   "sha256": "705f5df100ed11f4967b709be5b25c2a65dd73fa9cc2cb324c943353e40fc5a8",140   "language": "MATLAB",141   "lines": 210,142   "truncated": false,143   "block": 3,144   "row": 15573145  },146  {147   "path": "clean/LaBGAScore_prov_publish.m",148   "sha256": "9bccec39f86811dd9a298ba6570a017b009bceea8502a00f48aa12f13c6d783c",149   "language": "MATLAB",150   "lines": 439,151   "truncated": false,152   "block": 3,153   "row": 16725154  },155  {156   "path": "clean/LaBGAScore_prov_resolve_retrospective.m",157   "sha256": "c0ee59e86bd352349aee73836f06f5761fa4de5fd02684f08a341391d3873d65",158   "language": "MATLAB",159   "lines": 1237,160   "truncated": false,161   "block": 3,162   "row": 17173163  },164  {165   "path": "clean/LaBGAScore_prov_snapshot.m",166   "sha256": "87953095d556da71b26f952f753119e8e6bab198475fcd1c7c74cbbc801929cc",167   "language": "MATLAB",168   "lines": 533,169   "truncated": false,170   "block": 3,171   "row": 16832172  },173  {174   "path": "clean/LaBGAScore_run_reports.m",175   "sha256": "54bca2bcef73a688fa5709c4612d16d8445eecfb25f54aa06c684449331f03ec",176   "language": "MATLAB",177   "lines": 284,178   "truncated": false,179   "block": 3,180   "row": 16221181  },182  {183   "path": "clean/LaBGAScore_smart_parallel_pool_setup.m",184   "sha256": "d7ad232de8a02e50e70431e6f09985601743e74675b4fb885aef1f4b27ca5039",185   "language": "MATLAB",186   "lines": 54,187   "truncated": false,188   "block": 3,189   "row": 10950190  },191  {192   "path": "clean/checker_positive_controls/control_mvpa_reg_cov_permutation.m",193   "sha256": "2e667bac3a2dc7e610cf9e12228b3d4c46adb0ef79a8d6edb3114f95d3a8f400",194   "language": "MATLAB",195   "lines": 137,196   "truncated": false,197   "block": 3,198   "row": 15297199  },200  {201   "path": "clean/checker_positive_controls/control_set_after_use.m",202   "sha256": "c2acc630c390ad2beb8d71dcd24293f1ba47bcd6ed28cab86d4e690908d69432",203   "language": "MATLAB",204   "lines": 36,205   "truncated": false,206   "block": 3,207   "row": 11210208  },209  {210   "path": "clean/checker_positive_controls/control_use_before_def.m",211   "sha256": "b0e52a8af9f46a59833854132db544eb1def5f9c8d0fa01f5122756dcbabb1d5",212   "language": "MATLAB",213   "lines": 32,214   "truncated": false,215   "block": 3,216   "row": 10681217  },218  {219   "path": "clean/checker_positive_controls/run_controls.sh",220   "sha256": "d06958233d5060946be7896498d1fe0af6244d4636d8de2562cd22882b8f400c",221   "language": "Shell",222   "lines": 34,223   "truncated": false,224   "block": 4,225   "row": 1826226  },227  {228   "path": "clean/labgascore_prov_protect_reflogs.sh",229   "sha256": "b6e4fa04f624e3192b077fb4f229368d277ae95ef1295e6e19c025041fc0517c",230   "language": "Shell",231   "lines": 66,232   "truncated": false,233   "block": 4,234   "row": 1982235  },236  {237   "path": "clean/labgascore_run_headless.sh",238   "sha256": "21fc2a58076547c8f462b1e48ca011ed2a5c28d427620cfaa360388555ba1b8e",239   "language": "Shell",240   "lines": 230,241   "truncated": false,242   "block": 4,243   "row": 2234244  },245  {246   "path": "clean/set_after_use.py",247   "sha256": "d888dab58537b4d1b6683f6b0934a90914c41cd209d0b4316961d5394cdd5232",248   "language": "Python",249   "lines": 87,250   "truncated": false,251   "block": 3,252   "row": 21912253  },254  {255   "path": "clean/use_before_def.py",256   "sha256": "fed1a921b2fac3056fcc586af20d45a1fc36b5f374322849d061b0277b380935",257   "language": "Python",258   "lines": 69,259   "truncated": false,260   "block": 3,261   "row": 21190262  },263  {264   "path": "cosmomvpa/LaBGAScore_cosmomvpa_searchlight_rsa.m",265   "sha256": "e64ca91bbc5dc4cf80b3256a7cea1f20cb8f2a6f4658282291bade8a2adc3df8",266   "language": "MATLAB",267   "lines": 626,268   "truncated": false,269   "block": 3,270   "row": 16989271  },272  {273   "path": "decoding_toolbox/LaBGAScore_decoding_SVM_between_subjects.m",274   "sha256": "5f96f86e4c9e5e6b6bf91f74f6114b0127a6f19decca29e9e33fbf059dba4bda",275   "language": "MATLAB",276   "lines": 2004,277   "truncated": false,278   "block": 3,279   "row": 17257280  },281  {282   "path": "decoding_toolbox/LaBGAScore_decoding_template_xclass_acc.m",283   "sha256": "14a96c43f1f2f6b8bf564fd082ac09df4cc06cca61ad5e9a01d3d4c0a86fefa3",284   "language": "MATLAB",285   "lines": 412,286   "truncated": false,287   "block": 3,288   "row": 16660289  },290  {291   "path": "decoding_toolbox/LaBGAScore_export_scaled_contrasts.m",292   "sha256": "3cc8a889a450ebf44f5b01f415497ae70d623d6cdb3f63af6ea965bddafb4e2d",293   "language": "MATLAB",294   "lines": 119,295   "truncated": false,296   "block": 3,297   "row": 14743298  },299  {300   "path": "figures/canlabCmap.m",301   "sha256": "b6c534252aa68f616fab04fff0bec09bd9c48d57b0f2714076eef61e8d07ee1b",302   "language": "MATLAB",303   "lines": 3,304   "truncated": false,305   "block": 3,306   "row": 12690307  },308  {309   "path": "figures/cluster_surface_plots.m",310   "sha256": "24b38ec97202f88c904bcbf38f17922af9a91403a86097d8c59a8e299602f610",311   "language": "MATLAB",312   "lines": 81,313   "truncated": false,314   "block": 3,315   "row": 11979316  },317  {318   "path": "figures/plugin_set_figure_size.m",319   "sha256": "218db71ed9b8ac99af78ef39dbe3d0c575482fddf0658cca818b149fc6890f19",320   "language": "MATLAB",321   "lines": 381,322   "truncated": false,323   "block": 3,324   "row": 16811325  },326  {327   "path": "figures/save_all_open_figures_smart.m",328   "sha256": "0ee19b629a504a29312273e4ceb9506daf0325807eddf2620c19fe62d145366f",329   "language": "MATLAB",330   "lines": 199,331   "truncated": false,332   "block": 3,333   "row": 14163334  },335  {336   "path": "firstlevel/LaBGAScore_firstlevel_s1_options_dsgn_struct.m",337   "sha256": "fe925c290a5240436ba1be48ecaf8f3b9402b50bce5d17cadce7d861a17c3d17",338   "language": "MATLAB",339   "lines": 462,340   "truncated": false,341   "block": 3,342   "row": 16916343  },344  {345   "path": "firstlevel/LaBGAScore_firstlevel_s1a_options_dsgn_multisess_multitask.m",346   "sha256": "377671be1c760d0478ce87ff06ee31847bb18850b29065491d8922cb45811e8c",347   "language": "MATLAB",348   "lines": 475,349   "truncated": false,350   "block": 3,351   "row": 16929352  },353  {354   "path": "firstlevel/LaBGAScore_firstlevel_s1b_fit_phMRI_model.m",355   "sha256": "d1c8e35c5591682d94492dea37dc00ac47a3c51a44a045b9775d9162f3d7b848",356   "language": "MATLAB",357   "lines": 569,358   "truncated": false,359   "block": 3,360   "row": 17065361  },362  {363   "path": "firstlevel/LaBGAScore_firstlevel_s2_fit_model.m",364   "sha256": "8862b269c65c35cff496e689cb6b13b371f061d8debed5032ef3c3fc5116ea33",365   "language": "MATLAB",366   "lines": 1102,367   "truncated": false,368   "block": 3,369   "row": 17204370  },371  {372   "path": "firstlevel/LaBGAScore_firstlevel_s2a_fit_model_multisess_multitask.m",373   "sha256": "c8c713859319680937d2d01b937bfe52e220bf54f02c7e4e05005408943e0bc9",374   "language": "MATLAB",375   "lines": 2019,376   "truncated": false,377   "block": 3,378   "row": 17263379  },380  {381   "path": "firstlevel/LaBGAScore_firstlevel_s2b_phMRI_covar_contrasts.m",382   "sha256": "0f868d682205af6f61b26cab81140876918ff7eb010fc4d7267c865544d9a6c6",383   "language": "MATLAB",384   "lines": 326,385   "truncated": false,386   "block": 3,387   "row": 16579388  },389  {390   "path": "firstlevel/LaBGAScore_firstlevel_s3_diagnose_model.m",391   "sha256": "824307812ddb5430deb0ab4e406618f135e13c5e43d6724946fad88c074c427b",392   "language": "MATLAB",393   "lines": 98,394   "truncated": false,395   "block": 3,396   "row": 14204397  },398  {399   "path": "firstlevel/LaBGAScore_firstlevel_s3b_phMRI_signature_responses.m",400   "sha256": "b1a47f78b30b66647a9ee86f7b0ff7431c54ec274e3fe0f68b8311d940678a8d",401   "language": "MATLAB",402   "lines": 254,403   "truncated": false,404   "block": 3,405   "row": 16268406  },407  {408   "path": "firstlevel/LaBGAScore_firstlevel_s3c_phMRI_neurotransmitter_maps.m",409   "sha256": "5405b1f008c57f8737b23ac3e4d10e49abc48062340a50901bf6b12c896e46ea",410   "language": "MATLAB",411   "lines": 261,412   "truncated": false,413   "block": 3,414   "row": 16310415  },416  {417   "path": "firstlevel/functions/LaBGAScore_firstlevel_find_events.m",418   "sha256": "3a0da1ecc3988ec0f4eb7e1cbb01641f789539f030032acff36b81b377747fde",419   "language": "MATLAB",420   "lines": 111,421   "truncated": false,422   "block": 3,423   "row": 14550424  },425  {426   "path": "firstlevel/functions/LaBGAScore_firstlevel_refit_motion_comparison.m",427   "sha256": "fc0d9eb4fd4128347cc1d2bc347c4eb811a6fb814735274c4b7c09aad5eab950",428   "language": "MATLAB",429   "lines": 710,430   "truncated": false,431   "block": 3,432   "row": 17086433  },434  {435   "path": "firstlevel/functions/LaBGAScore_firstlevel_task_motion_diagnostics.m",436   "sha256": "867a03a426edd06714217db73512c59e33edebce16159fcd479af0d1623e09d9",437   "language": "MATLAB",438   "lines": 680,439   "truncated": false,440   "block": 3,441   "row": 17058442  },443  {444   "path": "firstlevel/functions/canlab_glm_subject_levels_old.m",445   "sha256": "f43681e5f359d7a15afa46ea3a497806ce3c0440f72b56339a3671aac50ac711",446   "language": "MATLAB",447   "lines": 690,448   "truncated": false,449   "block": 3,450   "row": 16959451  },452  {453   "path": "firstlevel/functions/canlab_glm_subject_levels_run1subject_old.m",454   "sha256": "e861519267efa8e2519c14c8fb37a58d7662c19e3bd4ad5d56841e7776a92391",455   "language": "MATLAB",456   "lines": 766,457   "truncated": false,458   "block": 3,459   "row": 17076460  },461  {462   "path": "graphvar/LaBGAScore_prep_graphvar_input_from_conn.m",463   "sha256": "2963b9f5712862eaddd2619afc2995429233c59528ec62220ab8dcabda065345",464   "language": "MATLAB",465   "lines": 360,466   "truncated": false,467   "block": 3,468   "row": 16633469  },470  {471   "path": "juspace/LaBGAScore_juspace_corr_behav.m",472   "sha256": "7743a733b3bef076a52dd33b4cd6d4b7c790e49c8ce8b09d525989d9918cc488",473   "language": "MATLAB",474   "lines": 141,475   "truncated": false,476   "block": 3,477   "row": 14414478  },479  {480   "path": "juspace/LaBGAScore_prep_juspace_input.m",481   "sha256": "56809f575703ef1c9c95d235c6a516fd3074222c0219ec9a16e3875adfa87d87",482   "language": "MATLAB",483   "lines": 308,484   "truncated": false,485   "block": 3,486   "row": 16163487  },488  {489   "path": "mrs/LaBGAScore_mrs_osprey_jobfile_GE.m",490   "sha256": "3f40137dcc4e230fb4ea8db411560bbf9bab133f74255ac06c83f401ff948176",491   "language": "MATLAB",492   "lines": 393,493   "truncated": false,494   "block": 3,495   "row": 16814496  },497  {498   "path": "mrs/LaBGAScore_mrs_osprey_jobfile_Philips.m",499   "sha256": "2a90d803e07afcc16b2e60ae613eb738e73862b0a663e3c0788a2ee0d124298b",500   "language": "MATLAB",501   "lines": 395,502   "truncated": false,503   "block": 3,504   "row": 16826505  },506  {507   "path": "mrs/LaBGAScore_mrs_osprey_single_sess_jobfile_GE.m",508   "sha256": "b2ce51adf8b8af2b1ffd1a750021701eb97f7a1e3f314cd399cdacd0fe16b825",509   "language": "MATLAB",510   "lines": 383,511   "truncated": false,512   "block": 3,513   "row": 16792514  },515  {516   "path": "mrs/LaBGAScore_mrs_osprey_single_sess_jobfile_Philips.m",517   "sha256": "2ce3e578f721556ea9df419eb8d464871ea984a630586e7bd30e1b52fe88e40f",518   "language": "MATLAB",519   "lines": 385,520   "truncated": false,521   "block": 3,522   "row": 16805523  },524  {525   "path": "mrs/LaBGAScore_mrs_run_osprey_GE.m",526   "sha256": "93f0b2df5c896a638cb4efb533c9c22a2eccb5f3eca98ec8749fc8c07d095b15",527   "language": "MATLAB",528   "lines": 317,529   "truncated": false,530   "block": 3,531   "row": 16398532  },533  {534   "path": "mrs/LaBGAScore_mrs_run_osprey_Philips.m",535   "sha256": "6f9634ab922c1b9304bde5f4003a16dee37dbbe12b6be3b0d57f31f0f6fdfd0d",536   "language": "MATLAB",537   "lines": 317,538   "truncated": false,539   "block": 3,540   "row": 16401541  },542  {543   "path": "mrs/LaBGAScore_prep_mrs2bids.m",544   "sha256": "b3b15c2a3df4a0e3623b7168cca868c188d35870ca8721594f241919d8c666ce",545   "language": "MATLAB",546   "lines": 392,547   "truncated": false,548   "block": 3,549   "row": 16753550  },551  {552   "path": "pet/functions/LCN12_PET_preprocessing.m",553   "sha256": "91f652871226603d150f3c3d58a6da082f2a5b0a42c1a04120f5b4ca0a817558",554   "language": "MATLAB",555   "lines": 430,556   "truncated": false,557   "block": 3,558   "row": 16918559  },560  {561   "path": "pet/functions/LCN12_analyze_headmovement_PET.m",562   "sha256": "cacaefffd6a327bc615ec90fe69a7a03ec98234eb72b8a2568c236f685555250",563   "language": "MATLAB",564   "lines": 128,565   "truncated": false,566   "block": 3,567   "row": 14589568  },569  {570   "path": "pet/functions/LCN12_generate_qc_from4D.m",571   "sha256": "128a887f04441baa2f53757d77623c99d3adbd0db1f9fc5c312e2dcad1a62345",572   "language": "MATLAB",573   "lines": 44,574   "truncated": false,575   "block": 3,576   "row": 11010577  },578  {579   "path": "pet/functions/LCN12_read_image.m",580   "sha256": "48820fe3aa2f0f029e1ad9c0c96fe951ec370e5e5b2b0e55f404fe71b7e66eef",581   "language": "MATLAB",582   "lines": 57,583   "truncated": false,584   "block": 3,585   "row": 12346586  },587  {588   "path": "pet/functions/LCN12_realign2_dy_PET.m",589   "sha256": "98e1b66c5d23bc796c8769180320dcb7501a48b60cff44d1e33a238cae24c7f1",590   "language": "MATLAB",591   "lines": 146,592   "truncated": false,593   "block": 3,594   "row": 15364595  },596  {597   "path": "pet/functions/LCN12_realign_dy_PET.m",598   "sha256": "e06cab4d9423871e473bfe0c6e7e29777efb5b03a112fa0c6bdb47f87b2beee5",599   "language": "MATLAB",600   "lines": 178,601   "truncated": false,602   "block": 3,603   "row": 15654604  },605  {606   "path": "pet/functions/LCN12_smooth.m",607   "sha256": "0202a9227568a9a620d2e7b09b2c33f64947706a14ca2745b9ef7278417e74a2",608   "language": "MATLAB",609   "lines": 56,610   "truncated": false,611   "block": 3,612   "row": 12380613  },614  {615   "path": "pet/functions/LCN12_write_image.m",616   "sha256": "f774d25ac7e6239185b267e924cbaa0e2843f1506363dced261830b9f1b29e8b",617   "language": "MATLAB",618   "lines": 85,619   "truncated": false,620   "block": 3,621   "row": 13532622  },623  {624   "path": "pet/functions/LCN_3Dimage_dilate.m",625   "sha256": "5dbc061adafca982e388a55056019df796bebe65c860144fa6cb5e0a85457f38",626   "language": "MATLAB",627   "lines": 28,628   "truncated": false,629   "block": 3,630   "row": 10036631  },632  {633   "path": "pet/functions/LCN_LOGAN.m",634   "sha256": "75958a864a1498eca313b12e4ad7ccb60155ecb50f36149e75ba4c4997f2d105",635   "language": "MATLAB",636   "lines": 86,637   "truncated": false,638   "block": 3,639   "row": 13488640  },641  {642   "path": "pet/functions/LCN_calc2_model_2T4k.m",643   "sha256": "3c723c5bd54a2a5a348bafc7cb6a6691f9482e9bda6cb7146c4cb9519ebe379a",644   "language": "MATLAB",645   "lines": 57,646   "truncated": false,647   "block": 3,648   "row": 12337649  },650  {651   "path": "pet/functions/LCN_calc2_model_2T4k_Vb.m",652   "sha256": "814fccd18d37b67f1a8094cbfe795af456f162d0312759beb1ffe25b4e88e442",653   "language": "MATLAB",654   "lines": 62,655   "truncated": false,656   "block": 3,657   "row": 12609658  },659  {660   "path": "pet/functions/LCN_calc_intact_tracer_hill.m",661   "sha256": "a275002172dc8506ccc3791f0b08363f46d399386298b0e366d4712b3dfd4523",662   "language": "MATLAB",663   "lines": 21,664   "truncated": false,665   "block": 3,666   "row": 9835667  },668  {669   "path": "pet/functions/LCN_calc_model_2T4k_vasc1k.m",670   "sha256": "cf0080843d82c534643c6aeb3598b5530a16a854a066e7d93bd8fede1171880f",671   "language": "MATLAB",672   "lines": 63,673   "truncated": false,674   "block": 3,675   "row": 12635676  },677  {678   "path": "pet/functions/LCN_calc_model_2T4k_vasc2k.m",679   "sha256": "d306cf114ee7d8db573c779e5e2f820dd396137deb9363bedc447b96776ed721",680   "language": "MATLAB",681   "lines": 62,682   "truncated": false,683   "block": 3,684   "row": 12716685  },686  {687   "path": "pet/functions/LCN_calc_model_selection.m",688   "sha256": "20e56c43dd7afc75813fd89f731e49876b55d961e2ec7ba6eb3314c7def028e6",689   "language": "MATLAB",690   "lines": 22,691   "truncated": false,692   "block": 3,693   "row": 9365694  },695  {696   "path": "pet/functions/LCN_check_filename.m",697   "sha256": "d01f604b30a09b0a9ce7df31e729d07de2716ee2f461bbb813d2e2de1c5e6ab0",698   "language": "MATLAB",699   "lines": 23,700   "truncated": false,701   "block": 3,702   "row": 9598703  },704  {705   "path": "pet/functions/LCN_cost_intact_tracer_hill.m",706   "sha256": "27eb82e1b57af5edd28fc75314d5223e5292fe454fb4704c488e1571ab4fc072",707   "language": "MATLAB",708   "lines": 32,709   "truncated": false,710   "block": 3,711   "row": 10716712  },713  {714   "path": "pet/functions/LCN_string.m",715   "sha256": "43398e39aa622dd005acef56e85f48fa60b1e8cc15a2c8c83d66db6f624ee421",716   "language": "MATLAB",717   "lines": 30,718   "truncated": false,719   "block": 3,720   "row": 10293721  },722  {723   "path": "pet/scripts/LaBGAScore_pet_a2_set_default_options.m",724   "sha256": "6460768a24f98f092adaefb880c0f20c0a041f94bed2e1399f287e65575ac62d",725   "language": "MATLAB",726   "lines": 333,727   "truncated": false,728   "block": 3,729   "row": 17097730  },731  {732   "path": "pet/scripts/LaBGAScore_pet_a_set_up_paths_always_run_first.m",733   "sha256": "286bf06470dddc0c0944310856cab0e0cbc3fe64abd0fa41677e594b54691c0d",734   "language": "MATLAB",735   "lines": 252,736   "truncated": false,737   "block": 3,738   "row": 16154739  },740  {741   "path": "pet/scripts/LaBGAScore_pet_dcm2bids.m",742   "sha256": "06aeb980650e749486fabd6b2c6c91cc1c6b531a9f222b421f94b8de5b726e0d",743   "language": "MATLAB",744   "lines": 137,745   "truncated": false,746   "block": 3,747   "row": 15310748  },749  {750   "path": "pet/scripts/LaBGAScore_pet_model_TSPO_DPA714.m",751   "sha256": "e7995b9b17bebb27b7fde45e714ccd38c4c242ddde47189d8b23f2921daf87c1",752   "language": "MATLAB",753   "lines": 1435,754   "truncated": false,755   "block": 3,756   "row": 17239757  },758  {759   "path": "pet/scripts/LaBGAScore_pet_prep_1_dat_behavioral_data.m",760   "sha256": "4287e0e677b17409863fd2d0c5a2fa8eac4f0ff7610ee019ba009c6d34465d1d",761   "language": "MATLAB",762   "lines": 140,763   "truncated": false,764   "block": 3,765   "row": 14724766  },767  {768   "path": "pet/scripts/LaBGAScore_pet_prep_2_load_image_data_and_save.m",769   "sha256": "11811a60def9969476af082bc607c4620a35eb6ae7b7f29e85f286256d6e2d64",770   "language": "MATLAB",771   "lines": 309,772   "truncated": false,773   "block": 3,774   "row": 16206775  },776  {777   "path": "pet/scripts/LaBGAScore_pet_prep_4_apply_signatures_and_save.m",778   "sha256": "ccaa42188b7bfeb302d4f25b80609907e12d9645a1c9ce8a4ab0ca83a2590fdb",779   "language": "MATLAB",780   "lines": 137,781   "truncated": false,782   "block": 3,783   "row": 14766784  },785  {786   "path": "pet/scripts/LaBGAScore_pet_preprocess_data.m",787   "sha256": "54dbd15f68e54ae46a1481df0bd441c475696c0b7ad01b8de76c9bc0b5890677",788   "language": "MATLAB",789   "lines": 221,790   "truncated": false,791   "block": 3,792   "row": 16099793  },794  {795   "path": "pet/scripts/LaBGAScore_pet_run_plot_PLS_ENet_pipeline.m",796   "sha256": "34d67e5efbdec14ebd668c9d0f14b7265a2ea76c7942c402b0312cd78e071d65",797   "language": "MATLAB",798   "lines": 531,799   "truncated": false,800   "block": 3,801   "row": 16712802  },803  {804   "path": "power/holmthreshold.m",805   "sha256": "f4acaddbc3f5d6c648c3f629508197ab9f17443fb4bef8c2ce34a9274e06d63e",806   "language": "MATLAB",807   "lines": 18,808   "truncated": false,809   "block": 3,810   "row": 8891811  },812  {813   "path": "power/medianIQR_to_meanSD.m",814   "sha256": "a241a545f67e00fb7af2a8829bb5ecb6d87df65f0dfa06f30d098bae59982efa",815   "language": "MATLAB",816   "lines": 47,817   "truncated": false,818   "block": 3,819   "row": 10489820  },821  {822   "path": "power/print_LEAR_matrix.m",823   "sha256": "17ad2f4c57407efc536bb8a099292178e6fe79462e4e41ac09e722aadf340439",824   "language": "MATLAB",825   "lines": 57,826   "truncated": false,827   "block": 3,828   "row": 10806829  },830  {831   "path": "power/sd_from_ci.m",832   "sha256": "8f9c5e78e8a4a993e01412c9de8e65a6786144e35cdb1ade98591f5b130631fd",833   "language": "MATLAB",834   "lines": 32,835   "truncated": false,836   "block": 3,837   "row": 9727838  },839  {840   "path": "prep/LaBGAScore_prep_parrec2bids.m",841   "sha256": "a1a1f8956aeef8ecb9dbf16b7819f1115f02f8d18c8470f9a4a13962db4c7ec4",842   "language": "MATLAB",843   "lines": 430,844   "truncated": false,845   "block": 3,846   "row": 16911847  },848  {849   "path": "prep/LaBGAScore_prep_s0_define_directories.m",850   "sha256": "288bdd8fe75ec4d660d7f426346f41492d188ff6d9e9b46e42d2f45ab41e0160",851   "language": "MATLAB",852   "lines": 111,853   "truncated": false,854   "block": 3,855   "row": 14207856  },857  {858   "path": "prep/LaBGAScore_prep_s1_write_events_tsv.m",859   "sha256": "d2b44665e5e7bb8f1dc085cad157480a4907619b181241ca7659271a4b082fd4",860   "language": "MATLAB",861   "lines": 411,862   "truncated": false,863   "block": 3,864   "row": 16843865  },866  {867   "path": "prep/LaBGAScore_prep_s1_write_events_tsv_multisess_multitask.m",868   "sha256": "587a6bdc597d712ae0b033482fc06a38b21c2bf4735d7e303338fb1dc44d3e61",869   "language": "MATLAB",870   "lines": 1029,871   "truncated": false,872   "block": 3,873   "row": 17219874  },875  {876   "path": "prep/LaBGAScore_prep_s2_smooth.m",877   "sha256": "3a146631e898452a112b2e761a10566a3861f90a460284822c400f68b1049f72",878   "language": "MATLAB",879   "lines": 134,880   "truncated": false,881   "block": 3,882   "row": 14585883  },884  {885   "path": "prep/LaBGAScore_prep_s2_smooth_multisess.m",886   "sha256": "e49593e3f5f2307513284b2f3314bc28e710fc8302d204c17b5b625f7691d31e",887   "language": "MATLAB",888   "lines": 156,889   "truncated": false,890   "block": 3,891   "row": 15063892  },893  {894   "path": "qr_code/QRtoPDF.py",895   "sha256": "4b2a472f1a4b4b11f97dd79ed7b7aae7760d81e97e9b46a136009d4cf9eae224",896   "language": "Python",897   "lines": 22,898   "truncated": false,899   "block": 3,900   "row": 18565901  },902  {903   "path": "qr_code/emailQR.py",904   "sha256": "5088f17d07c9a86a63f1a3f7f2898c6882a69e01ae28772847286781821b39f4",905   "language": "Python",906   "lines": 21,907   "truncated": false,908   "block": 3,909   "row": 18498910  },911  {912   "path": "qr_code/email_QR_Input.py",913   "sha256": "f355d80f19740eb14171c6822dcbfd36371b4b8b2118b7fa7bc5e80c15eb7ac7",914   "language": "Python",915   "lines": 22,916   "truncated": false,917   "block": 3,918   "row": 18465919  },920  {921   "path": "secondlevel/LaBGAScore_pdm_regenerate_reports.m",922   "sha256": "b92067b6789827672183873a3867d30cae5f559ac3b106eb9f4bdd1fb249d583",923   "language": "MATLAB",924   "lines": 85,925   "truncated": false,926   "block": 3,927   "row": 13962928  },929  {930   "path": "secondlevel/classes/ProgressTracker.m",931   "sha256": "80df12133ae5f72c233b010efbbcfd732e7ba0d197f12b88bf2fb693156358b4",932   "language": "MATLAB",933   "lines": 64,934   "truncated": false,935   "block": 3,936   "row": 11542937  },938  {939   "path": "secondlevel/functions/ENet_neuroimaging_pipeline.m",940   "sha256": "250f99b6d634b3ec48729b7aafd5792bacb732bf85123dc76a73f94b908aec83",941   "language": "MATLAB",942   "lines": 729,943   "truncated": false,944   "block": 3,945   "row": 17070946  },947  {948   "path": "secondlevel/functions/LaBGAScore_blob_montage.m",949   "sha256": "c2a6c26568670a50ac483bf1e1e67d70aa030c102898d9eb58a1bb94ccd4e881",950   "language": "MATLAB",951   "lines": 91,952   "truncated": false,953   "block": 3,954   "row": 14148955  },956  {957   "path": "secondlevel/functions/LaBGAScore_pdm_report.m",958   "sha256": "63ca722c8b07fdbf3d9f2165af0f48bb66f6e530c9c11a748e4d8af5baa81afe",959   "language": "MATLAB",960   "lines": 111,961   "truncated": false,962   "block": 3,963   "row": 14470964  },965  {966   "path": "secondlevel/functions/LaBGAScore_pdm_report_image.m",967   "sha256": "17e01ff7a3a9350a386389aac03db23554084942270646601ded8f51c33a01cd",968   "language": "MATLAB",969   "lines": 94,970   "truncated": false,971   "block": 3,972   "row": 13857973  },974  {975   "path": "secondlevel/functions/LaBGAScore_region_table.m",976   "sha256": "113b990d8b286ed4396cf60f52d9d13a0c8c2978b2374410504c7d7bb1f62038",977   "language": "MATLAB",978   "lines": 558,979   "truncated": false,980   "block": 3,981   "row": 16783982  },983  {984   "path": "secondlevel/functions/LaBGAScore_region_table_safe.m",985   "sha256": "50f89eab33db4a684731a02b98259c3159ce285f5ac1c2acea0dc417ddc4f8c6",986   "language": "MATLAB",987   "lines": 109,988   "truncated": false,989   "block": 3,990   "row": 14250991  },992  {993   "path": "secondlevel/functions/PLSDA_neuroimaging_pipeline.m",994   "sha256": "969a8da34e006dfe29ee30b947f11937f39f65c701ea48c0b179bd971dd3614e",995   "language": "MATLAB",996   "lines": 647,997   "truncated": false,998   "block": 3,999   "row": 169941000  },1001  {1002   "path": "secondlevel/functions/PLSDA_paired_neuroimaging_pipeline.m",1003   "sha256": "44f6354727e24bef7167a04c86657ac04004e5fddb74e435c809be4894e8ec0a",1004   "language": "MATLAB",1005   "lines": 468,1006   "truncated": false,1007   "block": 3,1008   "row": 166781009  },1010  {1011   "path": "secondlevel/functions/PLSR_neuroimaging_pipeline.m",1012   "sha256": "2f71c0f2d6a36be16a7a6aeaa71af61f8fa3774584484f9078645476d279d638",1013   "language": "MATLAB",1014   "lines": 669,1015   "truncated": false,1016   "block": 3,1017   "row": 170061018  },1019  {1020   "path": "secondlevel/functions/applyScaling.m",1021   "sha256": "f7a635e9bfe0603c21cd7d4aa7f5d81dc091c7bb4245b371474ab6d72d16606c",1022   "language": "MATLAB",1023   "lines": 47,1024   "truncated": false,1025   "block": 3,1026   "row": 113611027  },1028  {1029   "path": "secondlevel/functions/bootstrapOOB_ENet.m",1030   "sha256": "523ba6b428c87802020bde835157166c1b1ecb974aa2eafd7e9a98cf8004f940",1031   "language": "MATLAB",1032   "lines": 238,1033   "truncated": false,1034   "block": 3,1035   "row": 152321036  },1037  {1038   "path": "secondlevel/functions/bootstrapOOB_PLSDA.m",1039   "sha256": "0f15ca8be89d25280783f89be5d0d797c93da8c544383118d7f7bf9dadc325da",1040   "language": "MATLAB",1041   "lines": 122,1042   "truncated": false,1043   "block": 3,1044   "row": 134571045  },1046  {1047   "path": "secondlevel/functions/bootstrapOOB_PLSR.m",1048   "sha256": "bd914bbe94461138ddadd221dec0633d0fb7717158449e510e70302172ab9a11",1049   "language": "MATLAB",1050   "lines": 125,1051   "truncated": false,1052   "block": 3,1053   "row": 133841054  },1055  {1056   "path": "secondlevel/functions/capLV.m",1057   "sha256": "96939aaf652d64f3f2f8d85ec3c6f975ed49ca2b73ab2452edcddd8ebb8dc652",1058   "language": "MATLAB",1059   "lines": 37,1060   "truncated": false,1061   "block": 3,1062   "row": 106511063  },1064  {1065   "path": "secondlevel/functions/dice_statistic_image.m",1066   "sha256": "2ffd3d480effbb3215b7c11fcdf129cfb67971ae73621d76c2991f8c35803c5c",1067   "language": "MATLAB",1068   "lines": 113,1069   "truncated": false,1070   "block": 3,1071   "row": 141151072  },1073  {1074   "path": "secondlevel/functions/dice_statistic_image_by_roi.m",1075   "sha256": "5b1a267bdec74ec6c7513dbed75c32a363bce8d3e930d73aaf6d13514ef0715d",1076   "language": "MATLAB",1077   "lines": 158,1078   "truncated": false,1079   "block": 3,1080   "row": 151651081  },1082  {1083   "path": "secondlevel/functions/enetLambdaGrid.m",1084   "sha256": "2207d8e8d04a9cefca06eeff9e618a3940913343a9c24c981bc3bd0ca3c3e0c7",1085   "language": "MATLAB",1086   "lines": 32,1087   "truncated": false,1088   "block": 3,1089   "row": 108921090  },1091  {1092   "path": "secondlevel/functions/foldPreprocess.m",1093   "sha256": "f6c8ef669192cc0d2b825e31e6e1fd434e1ef3345e82d43a7a9777dfd9170fe8",1094   "language": "MATLAB",1095   "lines": 62,1096   "truncated": false,1097   "block": 3,1098   "row": 133181099  },1100  {1101   "path": "secondlevel/functions/globalBaselineCV.m",1102   "sha256": "5cea4cdc95cd996f9e2118fb5bc213e7d4747a86db7a21e6ecb4fc96bccdbb71",1103   "language": "MATLAB",1104   "lines": 123,1105   "truncated": false,1106   "block": 3,1107   "row": 139931108  },1109  {1110   "path": "secondlevel/functions/group_tfce_from_subject_maps.m",1111   "sha256": "5b2e8bd7387c23fc9b9105fbdc2bb132884cc298603f4a3d0a786213ffe48898",1112   "language": "MATLAB",1113   "lines": 402,1114   "truncated": false,1115   "block": 3,1116   "row": 166281117  },1118  {1119   "path": "secondlevel/functions/logitSafe.m",1120   "sha256": "72879d8d83cbea6c6505caf5f656a746e751259a5690f006da77c024d9583bc9",1121   "language": "MATLAB",1122   "lines": 13,1123   "truncated": false,1124   "block": 3,1125   "row": 88791126  },1127  {1128   "path": "secondlevel/functions/makeGroupedFolds.m",1129   "sha256": "faad6649a0824edddccf3a8e3287fb69cee1a54222e4807076b473cee728fd26",1130   "language": "MATLAB",1131   "lines": 27,1132   "truncated": false,1133   "block": 3,1134   "row": 98961135  },1136  {1137   "path": "secondlevel/functions/maskToSignificant.m",1138   "sha256": "1b45779f23c1cb2483db77fc9a68bf51fc6fc6d65d5a2b8f621e4aeb82e09cde",1139   "language": "MATLAB",1140   "lines": 83,1141   "truncated": false,1142   "block": 3,1143   "row": 131981144  },1145  {1146   "path": "secondlevel/functions/plot_ENet_diagnostics_neuroimaging.m",1147   "sha256": "215a0bcaa87c697c6079261b85631bdc2a5a847b1fa1831fbc8c6b188dca0a29",1148   "language": "MATLAB",1149   "lines": 659,1150   "truncated": false,1151   "block": 3,1152   "row": 169751153  },1154  {1155   "path": "secondlevel/functions/plot_PLSDA_diagnostics_neuroimaging.m",1156   "sha256": "ae3ef76b8cc652f1da9e23f5840175ccbb0b7e8bb7a804a6eef0358282912fd5",1157   "language": "MATLAB",1158   "lines": 552,1159   "truncated": false,1160   "block": 3,1161   "row": 168421162  },1163  {1164   "path": "secondlevel/functions/plot_PLSR_diagnostics_neuroimaging.m",1165   "sha256": "edbdf24a614392cd3adde95b184327ef35d4fca90c9451e2215fa6cd5bad693d",1166   "language": "MATLAB",1167   "lines": 1006,1168   "truncated": false,1169   "block": 3,1170   "row": 171211171  },1172  {1173   "path": "secondlevel/functions/quickCV_ENet.m",1174   "sha256": "72b1b6e78a3b4dc2078865ec891b1bd86be77eaa3d00efe5bb393ac8fbf0355b",1175   "language": "MATLAB",1176   "lines": 333,1177   "truncated": false,1178   "block": 3,1179   "row": 162761180  },1181  {1182   "path": "secondlevel/functions/quickCV_ENet_PR.m",1183   "sha256": "9e1600330a73a2e8b6c44c8547000a9551c682b5a5644dd5757a7571431e811d",1184   "language": "MATLAB",1185   "lines": 334,1186   "truncated": false,1187   "block": 3,1188   "row": 162841189  },1190  {1191   "path": "secondlevel/functions/quickCV_PLSDA.m",1192   "sha256": "7ef75f20cee8599471a9ceffe05de52744a6530a677c2411eb732cb74efd677d",1193   "language": "MATLAB",1194   "lines": 23,1195   "truncated": false,1196   "block": 3,1197   "row": 97121198  },1199  {1200   "path": "secondlevel/functions/quickCV_PLSDA_PR.m",

Showing the first 1,200 of 1470 lines. Download the file for the rest.