Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__leaddbs__leaddbs.json17922 linesDownload Raw Back to b6
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/leaddbs/leaddbs",4 "url": "https://github.com/leaddbs/leaddbs",5 "host": "github.com",6 "commit": "5b1008d705e97fe0c8f693dece14455607f4afac",7 "license": "GPL-3.0",8 "license_confirmed_by": "license file LICENSE.md",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE.md",13   "sha256": "1bbcaccbcfd0dca56031c7c629a32ee9d267728861289afd4a2ec180a8d000d3",14   "language": "License",15   "lines": 858,16   "truncated": false,17   "block": 3,18   "row": 817419  },20  {21   "path": "README.md",22   "sha256": "b2733009c2cd4e29d0f5ebf0e998bf2303a64ee87eee54b308dfb91e5de0b08c",23   "language": "Text",24   "lines": 57,25   "truncated": false,26   "block": 4,27   "row": 246428  },29  {30   "path": "classes/conda_utils/ea_conda.m",31   "sha256": "1927ec24cb3549b18161558b29a7841f6b4cca74ac5e20499b1272ea45282a9d",32   "language": "MATLAB",33   "lines": 172,34   "truncated": false,35   "block": 3,36   "row": 1535937  },38  {39   "path": "classes/conda_utils/ea_conda_env.m",40   "sha256": "77828046275c299e6bef8d829825310018c63787b2823ed16ae17a8dd688c00a",41   "language": "MATLAB",42   "lines": 151,43   "truncated": false,44   "block": 3,45   "row": 1476346  },47  {48   "path": "classes/conda_utils/ea_conda_setproxy.m",49   "sha256": "8b915ea484a1a4f644af1d01549ad8bc823bf9403fe46cfc37e321a5bb672c53",50   "language": "MATLAB",51   "lines": 20,52   "truncated": false,53   "block": 3,54   "row": 916555  },56  {57   "path": "classes/ea_roi/ea_loadatlas.m",58   "sha256": "ba29e80b8d05e597e12ec05d0054b6b756df93fc9f90398738b2110d13d97fd8",59   "language": "MATLAB",60   "lines": 32,61   "truncated": false,62   "block": 3,63   "row": 989564  },65  {66   "path": "classes/ea_roi/ea_roi.m",67   "sha256": "b46617d84cf5ef054d3a4d69ba3191ca6a24bd6290e6ce9f89005e5b3bc88669",68   "language": "MATLAB",69   "lines": 369,70   "truncated": false,71   "block": 3,72   "row": 1652773  },74  {75   "path": "classes/ea_roi/ea_roi2struct.m",76   "sha256": "5df152672e3b40576421e1e9d9222bee64f70ba8af37c2276ee69732a40f9bde",77   "language": "MATLAB",78   "lines": 13,79   "truncated": false,80   "block": 3,81   "row": 847282  },83  {84   "path": "classes/ea_roi/ea_roicontrol.m",85   "sha256": "00354d7c6dd17e566c5975b04fcedb591e3c3e00b0bb4478994df9f7c4e0b332",86   "language": "MATLAB",87   "lines": 282,88   "truncated": false,89   "block": 3,90   "row": 1620091  },92  {93   "path": "classes/ea_roi/ea_saveatlas.m",94   "sha256": "a2ec5fbb895a49b71e334f4451404c30e88dd66fb4d875807316c6617e7e7d96",95   "language": "MATLAB",96   "lines": 12,97   "truncated": false,98   "block": 3,99   "row": 8686100  },101  {102   "path": "classes/ea_roi/ea_struct2roi.m",103   "sha256": "44997fa83b26212cd356feba143b22200919d76253c4c264457d96580b5d4d0f",104   "language": "MATLAB",105   "lines": 11,106   "truncated": false,107   "block": 3,108   "row": 8443109  },110  {111   "path": "classes/ea_slicer_for_lead.m",112   "sha256": "9fa4cccbadce61f7cbc2abed7b47315e0a7ee6396ec42c975feea30db98b4e51",113   "language": "MATLAB",114   "lines": 113,115   "truncated": false,116   "block": 3,117   "row": 14314118  },119  {120   "path": "classes/ea_sweetspot/ea_sweetspot_blob.m",121   "sha256": "36d11472992187de25107e11421ed473eac9fd028ed5ed414adf308100764cf1",122   "language": "MATLAB",123   "lines": 314,124   "truncated": false,125   "block": 3,126   "row": 16448127  },128  {129   "path": "classes/ea_sweetspot/ea_sweetspot_hemi.m",130   "sha256": "2196911718444332d1bdac055effb6d270d0f292e43794d04f5fae29c2985fb5",131   "language": "MATLAB",132   "lines": 314,133   "truncated": false,134   "block": 3,135   "row": 16451136  },137  {138   "path": "classes/ea_sweetspot/ea_sweetspotcontrol.m",139   "sha256": "ffc89bef876aeb77c2f43d3a45d68652784f29c4f2111d4c737e5195b360b2ec",140   "language": "MATLAB",141   "lines": 277,142   "truncated": false,143   "block": 3,144   "row": 16181145  },146  {147   "path": "classes/ea_sweetspot/ea_sweetspotcontrol_hemi.m",148   "sha256": "120ef8207fa9f1dea7950a36ce79fb95d2902afdcd1c197cfcad3c797c84dfe3",149   "language": "MATLAB",150   "lines": 309,151   "truncated": false,152   "block": 3,153   "row": 16297154  },155  {156   "path": "classes/ea_symmat.m",157   "sha256": "b453a3ecee57276a68ed02d66fe065f343f047e6bb44b69cfcda4ab728821f12",158   "language": "MATLAB",159   "lines": 103,160   "truncated": false,161   "block": 3,162   "row": 13039163  },164  {165   "path": "classes/ea_trajectory/ea_synctrajectoryhandles.m",166   "sha256": "2701a587fe71f32668337aa48bfa4fb6ec6f4b5bb902b0cfb9b63d2fd7d21a79",167   "language": "MATLAB",168   "lines": 128,169   "truncated": false,170   "block": 3,171   "row": 14446172  },173  {174   "path": "classes/ea_trajectory/ea_trajectory.m",175   "sha256": "23863c56d0b3645ab541445b70f0da59b494ba663fad17c39ce7b0217d2db1a9",176   "language": "MATLAB",177   "lines": 605,178   "truncated": false,179   "block": 3,180   "row": 17003181  },182  {183   "path": "classes/ea_trajectory/ea_trajectorycontrol.m",184   "sha256": "c8fe72028a79a5f49af84460f73aa01d84057c203e4ab4b79083a6e3d23e2241",185   "language": "MATLAB",186   "lines": 1141,187   "truncated": false,188   "block": 3,189   "row": 17190190  },191  {192   "path": "classes/leadgroup/ea_calc_biophysical_lg.m",193   "sha256": "69c7c17c22fab3a2cac40b73bae69aaa63404d0b3e09ef0b1b56d0b57f4b2c73",194   "language": "MATLAB",195   "lines": 165,196   "truncated": false,197   "block": 3,198   "row": 15363199  },200  {201   "path": "cluster/ea_checkfilefolders.m",202   "sha256": "e83b91f7d15d89106c7e54c999ba26ed9278f2fb46045416c472ee0e0443f563",203   "language": "MATLAB",204   "lines": 9,205   "truncated": false,206   "block": 3,207   "row": 8300208  },209  {210   "path": "cluster/ea_checknoerrorfolders.m",211   "sha256": "86a227f20755c4079a3e684f7650319a8d9facfcc84fcff23258562cb749c0f9",212   "language": "MATLAB",213   "lines": 23,214   "truncated": false,215   "block": 3,216   "row": 8889217  },218  {219   "path": "cluster/ea_checknofilefolders.m",220   "sha256": "6e8b1855f1fa14930a8d3ed9b3cd9ae379c2d8ea2f59a296f3cfb6b606fe75cd",221   "language": "MATLAB",222   "lines": 9,223   "truncated": false,224   "block": 3,225   "row": 8295226  },227  {228   "path": "cluster/ea_run_HMS_Orchestra.m",229   "sha256": "1fe5a5d07585de9dff978701cbe999ba5ef644abcc061a5fff3da04f46e834d8",230   "language": "MATLAB",231   "lines": 19,232   "truncated": false,233   "block": 3,234   "row": 9601235  },236  {237   "path": "cluster/ea_run_HMS_Orchestra_long.m",238   "sha256": "e76ea6675ba9a55cfc4b4579f4f6976c5d24a2fe90af7fedd2ba2e1601531afd",239   "language": "MATLAB",240   "lines": 19,241   "truncated": false,242   "block": 3,243   "row": 9610244  },245  {246   "path": "cluster/ea_run_HMS_Orchestra_max.m",247   "sha256": "4dae11eaec14c9173b5fad9b2bf589b8c36809cad475fddae61f76735568b4f2",248   "language": "MATLAB",249   "lines": 19,250   "truncated": false,251   "block": 3,252   "row": 9613253  },254  {255   "path": "cluster/ea_run_HMS_Orchestra_medium.m",256   "sha256": "9f1a1f771755d2760819ab7f5bfa156f80bccbb5ea7c5ea4e026844a8b81e610",257   "language": "MATLAB",258   "lines": 19,259   "truncated": false,260   "block": 3,261   "row": 9618262  },263  {264   "path": "cluster/ea_run_Martinos_Launchpad.m",265   "sha256": "427811ee003c3bc6ca825c53c5bbe17d4b73268dc455124a38dd9a40157bf608",266   "language": "MATLAB",267   "lines": 19,268   "truncated": false,269   "block": 3,270   "row": 9530271  },272  {273   "path": "cluster/ea_run_Martinos_Launchpad_compile.m",274   "sha256": "0f7614aba6a6854ad8ad5defc8827bee72266dd4fcb268d3b80ae09b52b50579",275   "language": "MATLAB",276   "lines": 28,277   "truncated": false,278   "block": 3,279   "row": 10415280  },281  {282   "path": "common/ea_prefs_default.m",283   "sha256": "5e67cf8bbfc53b99eb95b70c48fc4626c1d6c30cebdada1cb3c5e9f1f61c62f4",284   "language": "MATLAB",285   "lines": 284,286   "truncated": false,287   "block": 3,288   "row": 16504289  },290  {291   "path": "connectomics/DWI_calculation.m",292   "sha256": "bae608bd7936c915ed63c4f1f268618d217c37b69229032bf9ec5599eb34bbd3",293   "language": "MATLAB",294   "lines": 241,295   "truncated": false,296   "block": 3,297   "row": 15513298  },299  {300   "path": "connectomics/convertHARDI2DTD.m",301   "sha256": "4f17843bacb9337926e6e01be0d5a345290b827d6cd947c29f4e180733be019c",302   "language": "MATLAB",303   "lines": 124,304   "truncated": false,305   "block": 3,306   "row": 13370307  },308  {309   "path": "connectomics/cv_build_graph_fig.m",310   "sha256": "579ea953ce2c5ca2e171c920382c41778e86ec53506ac1032f149dcb2a377299",311   "language": "MATLAB",312   "lines": 311,313   "truncated": false,314   "block": 3,315   "row": 15972316  },317  {318   "path": "connectomics/ea_DPS_nifti_to_hardi.m",319   "sha256": "68a7d3a8b44333a21452ac7b5c38d12dfce424f41da2ea62e7e4447b675369f1",320   "language": "MATLAB",321   "lines": 29,322   "truncated": false,323   "block": 3,324   "row": 9179325  },326  {327   "path": "connectomics/ea_DPS_nifti_to_mrs.m",328   "sha256": "1bbb7ea54ec261c9d5494cd942a108b9d635f5a6914c4acb6891ad8a384fbd96",329   "language": "MATLAB",330   "lines": 26,331   "truncated": false,332   "block": 3,333   "row": 9278334  },335  {336   "path": "connectomics/ea_DWI_calculation.m",337   "sha256": "a7479c6b4a37134604c238c001a9c82ac500ec59029fb2d1249e7baf14c616af",338   "language": "MATLAB",339   "lines": 237,340   "truncated": false,341   "block": 3,342   "row": 15454343  },344  {345   "path": "connectomics/ea_aff2axcodes.m",346   "sha256": "a4b56a9b752467685d14e7ff4e5fd95bb022ba6269f14e68d7fa9b1173baa32c",347   "language": "MATLAB",348   "lines": 81,349   "truncated": false,350   "block": 3,351   "row": 13303352  },353  {354   "path": "connectomics/ea_checkfschanges.m",355   "sha256": "d90b2229366906a0aa759b2235f1bc60e975aed6e1cc54a797686433481d122e",356   "language": "MATLAB",357   "lines": 20,358   "truncated": false,359   "block": 3,360   "row": 9718361  },362  {363   "path": "connectomics/ea_checkvatselection.m",364   "sha256": "37c09768e41b25dc4e290a30ddbcb45e1e2a0db428756e6cc55cc436ce714d04",365   "language": "MATLAB",366   "lines": 30,367   "truncated": false,368   "block": 3,369   "row": 10472370  },371  {372   "path": "connectomics/ea_computeGM.m",373   "sha256": "b3d19e71ed60ffb4e676f22a2114da6b7e7d0e4c1617c12b43651ee25e2644e0",374   "language": "MATLAB",375   "lines": 226,376   "truncated": false,377   "block": 3,378   "row": 15480379  },380  {381   "path": "connectomics/ea_concat_fMRI.m",382   "sha256": "cd97356989a97548de12cb888cd3f7005d883bac8bc15dbedfccb3b8d3e35ddb",383   "language": "MATLAB",384   "lines": 22,385   "truncated": false,386   "block": 3,387   "row": 8989388  },389  {390   "path": "connectomics/ea_convertHARDI2DTD.m",391   "sha256": "a58c55f783645ab6448e4919f1c7e40c2bd7a67662f341dadd091bef5d5ca972",392   "language": "MATLAB",393   "lines": 124,394   "truncated": false,395   "block": 3,396   "row": 13374397  },398  {399   "path": "connectomics/ea_convis.m",400   "sha256": "a0ba05927319ee68b54780f151c00be4dbc08535e778aa0feceeaf1cc3609ea5",401   "language": "MATLAB",402   "lines": 1346,403   "truncated": false,404   "block": 3,405   "row": 17172406  },407  {408   "path": "connectomics/ea_createCM_dti.m",409   "sha256": "ae1231f1c32d1039b07493919e5dd0533d5b69e7dd2912db374b576019413ec7",410   "language": "MATLAB",411   "lines": 184,412   "truncated": false,413   "block": 3,414   "row": 15641415  },416  {417   "path": "connectomics/ea_createCM_fmri.m",418   "sha256": "132c01903f87434714d8a36ff2df4e9e97465b1330641146b15902555a04c684",419   "language": "MATLAB",420   "lines": 37,421   "truncated": false,422   "block": 3,423   "row": 10918424  },425  {426   "path": "connectomics/ea_cvshowfiberconnectivities.m",427   "sha256": "5b3a45ea6c5a35a076ff6cc1b101dafc86a7519e1b2d5b5f66d5b924d23e5cd6",428   "language": "MATLAB",429   "lines": 1669,430   "truncated": false,431   "block": 3,432   "row": 17212433  },434  {435   "path": "connectomics/ea_cvshowvatdmri.m",436   "sha256": "61be3f66e0e73332175ecf9d0d96adf89e0d4eeaf9e0e9061bac7d8332b39ba6",437   "language": "MATLAB",438   "lines": 95,439   "truncated": false,440   "block": 3,441   "row": 13851442  },443  {444   "path": "connectomics/ea_cvshowvatfmri.m",445   "sha256": "82c871be1774a055812166541eea3d81f1fa73bf51ea8b632393a27631c29e77",446   "language": "MATLAB",447   "lines": 92,448   "truncated": false,449   "block": 3,450   "row": 13552451  },452  {453   "path": "connectomics/ea_cvshowvatresults.m",454   "sha256": "47e872d5112bad16c48e78ceb6b19982bce585207e672982d07bb40d9376be9d",455   "language": "MATLAB",456   "lines": 10,457   "truncated": false,458   "block": 3,459   "row": 8814460  },461  {462   "path": "connectomics/ea_dsistudiomat2ftr.m",463   "sha256": "d990146240cb7996e061d6815db70cc86820504c72a39adef769f63f808287ef",464   "language": "MATLAB",465   "lines": 69,466   "truncated": false,467   "block": 3,468   "row": 11783469  },470  {471   "path": "connectomics/ea_ensure_b0_coreg.m",472   "sha256": "9d426b1b618b6312e68dd58983c1bdfb2f601cc674bfa6c7e93d646a896a3905",473   "language": "MATLAB",474   "lines": 95,475   "truncated": false,476   "block": 3,477   "row": 13841478  },479  {480   "path": "connectomics/ea_ensure_fa_and_fa2anat.m",481   "sha256": "db7bc6899b6ecac3ff5a9759303b29bb88eaf4c4814ae0ae1614f8919c91ef3c",482   "language": "MATLAB",483   "lines": 86,484   "truncated": false,485   "block": 3,486   "row": 13279487  },488  {489   "path": "connectomics/ea_export_CM_png.m",490   "sha256": "15a62fdca6e179068ab956e9c526201f7a8a7bd88b500f2aec35a5dd66ebd7bd",491   "language": "MATLAB",492   "lines": 29,493   "truncated": false,494   "block": 3,495   "row": 9501496  },497  {498   "path": "connectomics/ea_exportb0.m",499   "sha256": "e0639d729097ffb30f534442821a2e01b1661eebace917df658dd560669e087a",500   "language": "MATLAB",501   "lines": 93,502   "truncated": false,503   "block": 3,504   "row": 13788505  },506  {507   "path": "connectomics/ea_extract_timecourses.m",508   "sha256": "432a3dd7cead3280ef451548d6dc10c1d9098e6d8395c02719c218488d1739c3",509   "language": "MATLAB",510   "lines": 470,511   "truncated": false,512   "block": 3,513   "row": 16646514  },515  {516   "path": "connectomics/ea_extract_timecourses_vat.m",517   "sha256": "4c65d93c980b1c2a7b6f93860bd14d2beebd82a8a3d915cb9e8698d124168f75",518   "language": "MATLAB",519   "lines": 305,520   "truncated": false,521   "block": 3,522   "row": 15950523  },524  {525   "path": "connectomics/ea_fibers2connectome.m",526   "sha256": "dc35d2c15736750ae2212018bb41990f2ec47297ebd87e002e4df6d13f171141",527   "language": "MATLAB",528   "lines": 17,529   "truncated": false,530   "block": 3,531   "row": 8703532  },533  {534   "path": "connectomics/ea_ft_deterministictracking_kroon.m",535   "sha256": "7388bebfbcedc609724aef7b729092093e0ab99931949a6fa5bcb8218972902b",536   "language": "MATLAB",537   "lines": 104,538   "truncated": false,539   "block": 3,540   "row": 14376541  },542  {543   "path": "connectomics/ea_ft_globaltracking_reisert.m",544   "sha256": "b9931f2bb9e2624382a71ce3eea313903657976b3807c9ef80028f21b2d2fa65",545   "language": "MATLAB",546   "lines": 104,547   "truncated": false,548   "block": 3,549   "row": 14511550  },551  {552   "path": "connectomics/ea_ft_gqi_yeh.m",553   "sha256": "61886d967cef3c30bc7163ae20348a822a1694c6c50fe5222f8804ef03a15055",554   "language": "MATLAB",555   "lines": 208,556   "truncated": false,557   "block": 3,558   "row": 15822559  },560  {561   "path": "connectomics/ea_ft_mesotracking_reisert.m",562   "sha256": "5a7848a923f9a4b8d971f974822bcf278772049704e823be8b8e2e26d75b5b62",563   "language": "MATLAB",564   "lines": 160,565   "truncated": false,566   "block": 3,567   "row": 15276568  },569  {570   "path": "connectomics/ea_ftr2nii.m",571   "sha256": "f4d15d8c4624e55ee1e9ce4c451a7f94ed51d7a8ee8fbcf959b98288e9b8e125",572   "language": "MATLAB",573   "lines": 46,574   "truncated": false,575   "block": 3,576   "row": 11279577  },578  {579   "path": "connectomics/ea_ftr2trk.m",580   "sha256": "881d74f4500068fbd465ae4d295663b3df51b54541be0fe5507709da6f2c1abe",581   "language": "MATLAB",582   "lines": 211,583   "truncated": false,584   "block": 3,585   "row": 15493586  },587  {588   "path": "connectomics/ea_genmodlist.m",589   "sha256": "9aed01320a549defb152a8e1ece9a06af1ef4a7c5cdf8a60423300ab6471b7c8",590   "language": "MATLAB",591   "lines": 128,592   "truncated": false,593   "block": 3,594   "row": 14189595  },596  {597   "path": "connectomics/ea_gentrackingmask.m",598   "sha256": "b590bc0e0708dcce88aed6c8d82c79e8a9d3ad9ea964c115eeb9816e9a415401",599   "language": "MATLAB",600   "lines": 120,601   "truncated": false,602   "block": 3,603   "row": 15317604  },605  {606   "path": "connectomics/ea_gentrackingmask_brainmask.m",607   "sha256": "425d6da5eda8adcb85b87a58fa0cff868effe59de6504ee45c8899cb25a681a6",608   "language": "MATLAB",609   "lines": 301,610   "truncated": false,611   "block": 3,612   "row": 16548613  },614  {615   "path": "connectomics/ea_initlcopts.m",616   "sha256": "39e7d3011815034c4e1f07fdc9415a70f0049af9e274e6e507a5e1b42b636297",617   "language": "MATLAB",618   "lines": 39,619   "truncated": false,620   "block": 3,621   "row": 10142622  },623  {624   "path": "connectomics/ea_isolate_fa.m",625   "sha256": "4201e1388415f034c643ffa7b8de31229d4695e35ef8875a9e1e0359d3fbbec9",626   "language": "MATLAB",627   "lines": 43,628   "truncated": false,629   "block": 3,630   "row": 10080631  },632  {633   "path": "connectomics/ea_lc2handles.m",634   "sha256": "73cb4d0f7f49af437bd6b06cfeca0b3bf271459f63dcebcce8950f61915e8007",635   "language": "MATLAB",636   "lines": 128,637   "truncated": false,638   "block": 3,639   "row": 14240640  },641  {642   "path": "connectomics/ea_loadfibertracts.m",643   "sha256": "dc36a286ac227f3b7f271873c0005decafa69388d2a7a0bd5b7333bd0e9cd52c",644   "language": "MATLAB",645   "lines": 108,646   "truncated": false,647   "block": 3,648   "row": 12501649  },650  {651   "path": "connectomics/ea_nbs_advanced.m",652   "sha256": "f59ac043f2d70248b44ed0571824b733b8ca67d533854e01d9eeafd561088657",653   "language": "MATLAB",654   "lines": 244,655   "truncated": false,656   "block": 3,657   "row": 16122658  },659  {660   "path": "connectomics/ea_nifti_to_DTD.m",661   "sha256": "ddfd83d333081ccbb259b2cc42661a87a7f39257498388e294ddb0c42b881d31",662   "language": "MATLAB",663   "lines": 37,664   "truncated": false,665   "block": 3,666   "row": 10866667  },668  {669   "path": "connectomics/ea_normalize_fibers.m",670   "sha256": "5aa60beaa992d29e7cb669fb936bad826d4423030b909b08535f45bfd3aa4acc",671   "language": "MATLAB",672   "lines": 471,673   "truncated": false,674   "block": 3,675   "row": 16861676  },677  {678   "path": "connectomics/ea_perform_ft_proxy.m",679   "sha256": "376c70be98b0e369d7af267262caa9a8747271ad575635da951f7a3f4d83d987",680   "language": "MATLAB",681   "lines": 29,682   "truncated": false,683   "block": 3,684   "row": 10060685  },686  {687   "path": "connectomics/ea_perform_lc.m",688   "sha256": "98a04130b420f983b3d8cc27494c4e3dc37343b98d6e97b4ae1e757877455daa",689   "language": "MATLAB",690   "lines": 278,691   "truncated": false,692   "block": 3,693   "row": 16395694  },695  {696   "path": "connectomics/ea_plot_fiber.m",697   "sha256": "49b4e54fa63f18534183f3cb1c4a8b3508a3c43bed932109b302a02d5954aeb6",698   "language": "MATLAB",699   "lines": 22,700   "truncated": false,701   "block": 3,702   "row": 10298703  },704  {705   "path": "connectomics/ea_prepare_dti.m",706   "sha256": "5027bb52857f2fa1e8b084d417b7b6a5897887b11b430b02d837d018f2db8602",707   "language": "MATLAB",708   "lines": 74,709   "truncated": false,710   "block": 3,711   "row": 13559712  },713  {714   "path": "connectomics/ea_prepare_dti_bids.m",715   "sha256": "8576906c1d67f0014567069773b2f86985c315e3b72aa0e9c35cba3aa59d5636",716   "language": "MATLAB",717   "lines": 80,718   "truncated": false,719   "block": 3,720   "row": 13484721  },722  {723   "path": "connectomics/ea_prepare_hardi.m",724   "sha256": "f9e048848f05d5fe86d8c6239a42d614d575dbe9c9db615de5d0dcd5bdab71bb",725   "language": "MATLAB",726   "lines": 19,727   "truncated": false,728   "block": 3,729   "row": 9681730  },731  {732   "path": "connectomics/ea_preprocess_fmri.m",733   "sha256": "128c2d9778c4182c36f5d7acd91e711f150a7a22a9c78381efc9081b1f921e13",734   "language": "MATLAB",735   "lines": 232,736   "truncated": false,737   "block": 3,738   "row": 16083739  },740  {741   "path": "connectomics/ea_query_sim_connectomematrix.m",742   "sha256": "994b569252032184521c43a75fe9a78ab283ab7f48fcb027371d085dd2c85271",743   "language": "MATLAB",744   "lines": 29,745   "truncated": false,746   "block": 3,747   "row": 10017748  },749  {750   "path": "connectomics/ea_savefibertracts.m",751   "sha256": "b5de9f66823cfc2354df1d416b9c6b741c266a0a91c29429a85f9dc4e045acf7",752   "language": "MATLAB",753   "lines": 25,754   "truncated": false,755   "block": 3,756   "row": 9003757  },758  {759   "path": "connectomics/ea_showconnectivitypatch.m",760   "sha256": "53bb7310fcbef6457cca34af058ce4b50c3e6962dbb6c4290d1bbeb716f90694",761   "language": "MATLAB",762   "lines": 88,763   "truncated": false,764   "block": 3,765   "row": 12804766  },767  {768   "path": "connectomics/ea_showfiber.m",769   "sha256": "210ef32d8777b9e749f018997fae17f5b4217286253fe9da894b5cbcc0ca39f0",770   "language": "MATLAB",771   "lines": 96,772   "truncated": false,773   "block": 3,774   "row": 13366775  },776  {777   "path": "connectomics/ea_showseedpatch.m",778   "sha256": "96df02f344c114ce99429846166c61ce832233ba72fb6bcae30ea013ece7813a",779   "language": "MATLAB",780   "lines": 29,781   "truncated": false,782   "block": 3,783   "row": 9694784  },785  {786   "path": "connectomics/ea_trk2ftr.m",787   "sha256": "b9aac7f91e14726ec58b4682c471e1d92a8480f049b6ac29db059b29200b9b00",788   "language": "MATLAB",789   "lines": 116,790   "truncated": false,791   "block": 3,792   "row": 13842793  },794  {795   "path": "connectomics/ea_warp_parcellation.m",796   "sha256": "07c28cbda163c1e5c25b014da4915f366fe5aa1235fe093e44f196d1cc5d59f5",797   "language": "MATLAB",798   "lines": 244,799   "truncated": false,800   "block": 3,801   "row": 16315802  },803  {804   "path": "connectomics/ea_warp_vat.m",805   "sha256": "b867e0538c7da5c6f33d0803595ed7fa2b2b7c1890a8992bfcd2b31eed13343b",806   "language": "MATLAB",807   "lines": 88,808   "truncated": false,809   "block": 3,810   "row": 13075811  },812  {813   "path": "connectomics/lead_connectome.m",814   "sha256": "30ea0b99ffcaa7e38f51dad0734f196dd1a2538c772df55b635ade7ff1dcfbe6",815   "language": "MATLAB",816   "lines": 977,817   "truncated": false,818   "block": 3,819   "row": 17117820  },821  {822   "path": "connectomics/mapper/connectome.sh",823   "sha256": "445b3c5db049443e860f6c726dabd62325242fbf331e8770148d716c2c1e5467",824   "language": "Shell",825   "lines": 176,826   "truncated": false,827   "block": 4,828   "row": 2233829  },830  {831   "path": "connectomics/mapper/connectome_orchestra.sh",832   "sha256": "6863c3b99b2bcd99947aa4488e428d80e175224e6e0024096a34598a333db95c",833   "language": "Shell",834   "lines": 148,835   "truncated": false,836   "block": 4,837   "row": 2214838  },839  {840   "path": "connectomics/mapper/cs_dmri_conseed.m",841   "sha256": "2251c49071a7a532d54427cefedb88d1ec6d52001c3478fea7ec5fd608c5f3a6",842   "language": "MATLAB",843   "lines": 203,844   "truncated": false,845   "block": 3,846   "row": 15718847  },848  {849   "path": "connectomics/mapper/cs_dmri_conseed_map.m",850   "sha256": "552665ba2b09d542de91b29e2cc15617f8e1c090753fd3a83d910269bb064182",851   "language": "MATLAB",852   "lines": 196,853   "truncated": false,854   "block": 3,855   "row": 15778856  },857  {858   "path": "connectomics/mapper/cs_fmri_conseed_matrix.m",859   "sha256": "becb60034b187582d603034941ae0059835149b792a9780e5eab95eb3074f3ce",860   "language": "MATLAB",861   "lines": 423,862   "truncated": false,863   "block": 3,864   "row": 16512865  },866  {867   "path": "connectomics/mapper/cs_fmri_conseed_matrix_matrix.m",868   "sha256": "7446ffc0ce389c55c5113bfa670d51324c819a865f3b3a6d933a3be6fb8b5cb7",869   "language": "MATLAB",870   "lines": 167,871   "truncated": false,872   "block": 3,873   "row": 15226874  },875  {876   "path": "connectomics/mapper/cs_fmri_conseed_nifti.m",877   "sha256": "33be04a8314ded4a6d508fce70bd415157b25abfffded0e99cd52ae96813c9c7",878   "language": "MATLAB",879   "lines": 443,880   "truncated": false,881   "block": 3,882   "row": 16726883  },884  {885   "path": "connectomics/mapper/cs_fmri_conseed_pmap.m",886   "sha256": "ff61f0b3e1c5fabaf09f119c9ab6fefd1b84f3b231d3af29f5f95b495598c6cc",887   "language": "MATLAB",888   "lines": 362,889   "truncated": false,890   "block": 3,891   "row": 16298892  },893  {894   "path": "connectomics/mapper/cs_fmri_conseed_pseed.m",895   "sha256": "7f2816711bbbe231eb48285b9ee4037857da99eaa4e4a398dad13e3ca62de528",896   "language": "MATLAB",897   "lines": 587,898   "truncated": false,899   "block": 3,900   "row": 16933901  },902  {903   "path": "connectomics/mapper/cs_fmri_conseed_seed_matrix.m",904   "sha256": "1dbbaade19d4bdbda1c3ece9013a2909c527f118d24a061c9f4c135c11622b5c",905   "language": "MATLAB",906   "lines": 296,907   "truncated": false,908   "block": 3,909   "row": 16055910  },911  {912   "path": "connectomics/mapper/cs_fmri_conseed_seed_tc.m",913   "sha256": "ac31203677d3c8cf8201424965bbd3d9889ee52e903e16e5fc5ed86df950c7ac",914   "language": "MATLAB",915   "lines": 749,916   "truncated": false,917   "block": 3,918   "row": 16999919  },920  {921   "path": "connectomics/mapper/ea_conformseedtofmri.m",922   "sha256": "d34018195fe99838439f9d700c361d2269edbe0c47dc96d2a0c6c11e58f61178",923   "language": "MATLAB",924   "lines": 53,925   "truncated": false,926   "block": 3,927   "row": 11789928  },929  {930   "path": "connectomics/mapper/ea_getoutputfolder.m",931   "sha256": "7664557f4cbc62ef187886a603edabec4b918ebeee7b93db7342a578e2a85e34",932   "language": "MATLAB",933   "lines": 12,934   "truncated": false,935   "block": 3,936   "row": 8722937  },938  {939   "path": "connectomics/mapper/ea_getrois.m",940   "sha256": "33dc4d54fca4c0165dc6f9a3a6ec5c81f2e503c236fd2e8ed804e2191bb9813c",941   "language": "MATLAB",942   "lines": 2,943   "truncated": false,944   "block": 3,945   "row": 8209946  },947  {948   "path": "connectomics/mapper/ea_handleseeds.m",949   "sha256": "dab63ede5807b7105a4cca3ce285993cff063de25804247baee703d37fcd81ef",950   "language": "MATLAB",951   "lines": 39,952   "truncated": false,953   "block": 3,954   "row": 9741955  },956  {957   "path": "connectomics/mapper/ea_lcm.m",958   "sha256": "5494ddd366c977b21e7beae434968dd087e9d5fdf83a1a6800d5fbcc257d5a51",959   "language": "MATLAB",960   "lines": 368,961   "truncated": false,962   "block": 3,963   "row": 16556964  },965  {966   "path": "connectomics/mapper/ea_lcm_func.m",967   "sha256": "22a2563e71ca2d1c817470f7f255c62cdb8389ff740e9bcba3404dc4c27645f9",968   "language": "MATLAB",969   "lines": 126,970   "truncated": false,971   "block": 3,972   "row": 14651973  },974  {975   "path": "connectomics/mapper/ea_lcm_resolvecmd.m",976   "sha256": "eb8b3d6604059514a72083c4eff5df7064e299c4d655c068b15d3baac806151d",977   "language": "MATLAB",978   "lines": 13,979   "truncated": false,980   "block": 3,981   "row": 8354982  },983  {984   "path": "connectomics/mapper/ea_lcm_struc.m",985   "sha256": "83ffb1fb03a190f423f6c37253cee820801e41838d52f6c7ac8da3e1dd43fd0f",986   "language": "MATLAB",987   "lines": 21,988   "truncated": false,989   "block": 3,990   "row": 9364991  },992  {993   "path": "connectomics/mapper/ea_updatemodpopups.m",994   "sha256": "bd057f06bf976df18710de8d290934f7b95381366ef546559074784b0a475ef5",995   "language": "MATLAB",996   "lines": 12,997   "truncated": false,998   "block": 3,999   "row": 88051000  },1001  {1002   "path": "connectomics/mapper/lead_mapper.m",1003   "sha256": "650f7d7ffeb0854a81b325cde970b4c4b6701c2c864983506b3da35b31244c61",1004   "language": "MATLAB",1005   "lines": 496,1006   "truncated": false,1007   "block": 3,1008   "row": 168151009  },1010  {1011   "path": "connectomics/mapper/makeconseed.m",1012   "sha256": "934f88411c72df53d0dc2348e8a8425e15bef5f00aa7509ed0cf08a000ef2bfe",1013   "language": "MATLAB",1014   "lines": 5,1015   "truncated": false,1016   "block": 3,1017   "row": 83661018  },1019  {1020   "path": "connectomics/mapper/makeroi2roicorrel.m",1021   "sha256": "3e4f60cd46202fcc1f0b0932a31e7154936a259361082a85c0454d308e5d6a64",1022   "language": "MATLAB",1023   "lines": 1,1024   "truncated": false,1025   "block": 3,1026   "row": 81771027  },1028  {1029   "path": "connectomics/mapper/roi2roi_correl.m",1030   "sha256": "b94e83e9ebdafce4a058b6aa8ed0c815179331869c5baf081f73e700800e4e19",1031   "language": "MATLAB",1032   "lines": 38,1033   "truncated": false,1034   "block": 3,1035   "row": 98091036  },1037  {1038   "path": "connectomics/mapper/roi2roicorrel.sh",1039   "sha256": "faa7f5b47831214bd2cbca05bc33253c56b7d3150f213633a7915bf5567b09cf",1040   "language": "Shell",1041   "lines": 66,1042   "truncated": false,1043   "block": 4,1044   "row": 19811045  },1046  {1047   "path": "dbshub/ea_exportscore.m",1048   "sha256": "a4323f100bf02a220d477c6f9d9c5fa0040df04cbb789e6591a1459abc9e46f4",1049   "language": "MATLAB",1050   "lines": 18,1051   "truncated": false,1052   "block": 3,1053   "row": 95331054  },1055  {1056   "path": "dependency/ea_findpeaks.m",1057   "sha256": "821468e81b9eb64a8fd45356f6878d3d71fbfa8474d759441803435d5bcfa2d9",1058   "language": "MATLAB",1059   "lines": 14,1060   "truncated": false,1061   "block": 3,1062   "row": 88661063  },1064  {1065   "path": "dependency/ea_getrawct2preniimat.m",1066   "sha256": "226fea16bd49bf5c573cbf1aab933942209209451214cd4bfb8b9d37ecbef202",1067   "language": "MATLAB",1068   "lines": 75,1069   "truncated": false,1070   "block": 3,1071   "row": 140081072  },1073  {1074   "path": "dependency/ea_newline.m",1075   "sha256": "536bbce3b73313c67c14599ab82b8d0d91a120c6c82f8720a36a66af80f77c02",1076   "language": "MATLAB",1077   "lines": 5,1078   "truncated": false,1079   "block": 3,1080   "row": 82541081  },1082  {1083   "path": "dependency/ea_pdist.m",1084   "sha256": "5a4754b1ebc4c083f182ef1332dfa956f942fe6736478437a3452a34d0cdfd0c",1085   "language": "MATLAB",1086   "lines": 7,1087   "truncated": false,1088   "block": 3,1089   "row": 82581090  },1091  {1092   "path": "dependency/ea_pdist2.m",1093   "sha256": "130114fc0f4b3cb42a751939bfc9f681a36624958dd99281a1222b67e6c24737",1094   "language": "MATLAB",1095   "lines": 183,1096   "truncated": false,1097   "block": 3,1098   "row": 147141099  },1100  {1101   "path": "dependency/ea_sgolayfilt.m",1102   "sha256": "b0357d6f16c8f575ee8be3ac087e4defb52ef45ab7e0e641c4986a97d7f7eff6",1103   "language": "MATLAB",1104   "lines": 65,1105   "truncated": false,1106   "block": 3,1107   "row": 125141108  },1109  {1110   "path": "dependency/ea_sqdist.m",1111   "sha256": "1095521881547a3e9990bceb6422eac23d781c0229bf5fd53a4ac66537a0cc54",1112   "language": "MATLAB",1113   "lines": 8,1114   "truncated": false,1115   "block": 3,1116   "row": 85441117  },1118  {1119   "path": "dependency/ea_vecnorm.m",1120   "sha256": "d7889b1f790f4ff68a30a0c90f66569cdd97da50bc495dfa203f92bbc7be262d",1121   "language": "MATLAB",1122   "lines": 16,1123   "truncated": false,1124   "block": 3,1125   "row": 84541126  },1127  {1128   "path": "dependency/flag_implicit_skip_nan.m",1129   "sha256": "fdc2708181a23b692bba9daff5d50bbd4b88c8b1dff34794e07669167202d9a6",1130   "language": "MATLAB",1131   "lines": 65,1132   "truncated": false,1133   "block": 3,1134   "row": 128231135  },1136  {1137   "path": "dependency/octave_pdist.m",1138   "sha256": "0acf0852eba29feec3a443bca762181dffad1b7704b45516928a400bbfedba7a",1139   "language": "MATLAB",1140   "lines": 223,1141   "truncated": false,1142   "block": 3,1143   "row": 156881144  },1145  {1146   "path": "dependency/sumskipnan.m",1147   "sha256": "0eeb50d409cf649c0d0fe84e0b0dbe33dafd8ea9f5b2709887cd0512cd5d18a3",1148   "language": "MATLAB",1149   "lines": 195,1150   "truncated": false,1151   "block": 3,1152   "row": 150551153  },1154  {1155   "path": "dependency/sumsq.m",1156   "sha256": "23c2166da0521686848927288633ee768d69adedbebf5bbb5b995eee7ee6d7d7",1157   "language": "MATLAB",1158   "lines": 50,1159   "truncated": false,1160   "block": 3,1161   "row": 111031162  },1163  {1164   "path": "dev/craddock_2011_parcellations/crad2lead.m",1165   "sha256": "26d8fddb568e3ab3b2ddfee6679d1ca14d40106b03cba0be31dde15a6a17caf5",1166   "language": "MATLAB",1167   "lines": 22,1168   "truncated": false,1169   "block": 3,1170   "row": 91421171  },1172  {1173   "path": "dev/ea_atlaseditor.m",1174   "sha256": "06cf3a041c0889bc717c6c7912df706f8baa9acb621c0e3987ba814ec2512667",1175   "language": "MATLAB",1176   "lines": 186,1177   "truncated": false,1178   "block": 3,1179   "row": 157521180  },1181  {1182   "path": "dev/ea_plan_revision.m",1183   "sha256": "f3390df1d3c9b90075bcd8fc6e68ebed0c1dddc065b8fe9d4a77ae13bdce6397",1184   "language": "MATLAB",1185   "lines": 54,1186   "truncated": false,1187   "block": 3,1188   "row": 123001189  },1190  {1191   "path": "dev/ea_predict_module.m",1192   "sha256": "3537c9a96fc55b5be1d83ddc9966cbe568c574cdfe65544c1c5c09586099b5fb",1193   "language": "MATLAB",1194   "lines": 94,1195   "truncated": false,1196   "block": 3,1197   "row": 140751198  },1199  {1200   "path": "dev/ea_upload_export.m",

Showing the first 1,200 of 17922 lines. Download the file for the rest.