OpenScientificCodeRegistry/Database
Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.
05.6k
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/inm-6/multi-area-model",4 "url": "https://github.com/INM-6/multi-area-model",5 "host": "github.com",6 "commit": "0a658be40bef3249cbe452f38809edf7d2f524ba",7 "license": "CC-BY-NC-SA-4.0",8 "license_confirmed_by": "license file LICENSE.md",9 "redistribution": "with_conditions",10 "files": [11 {12 "path": "LICENSE.md",13 "sha256": "03c97a9043f3d8254400eb754f828873eb7510dd3fd02a7ceba5c963e4b21665",14 "language": "License",15 "lines": 108,16 "truncated": false,17 "block": 14,18 "row": 1722619 },20 {21 "path": "M2E_statistical_test.ipynb",22 "sha256": "1c4604dfae77603c21f3933a82ce9dcb3c98ffbd846e2837d950e91ca9360dd2",23 "language": "Jupyter",24 "lines": 100,25 "truncated": false,26 "block": 14,27 "row": 1516328 },29 {30 "path": "README.md",31 "sha256": "62c90f1fc859c74395e7674271ea795ad2953ca2ae3d32d66e4ddf3651066552",32 "language": "Text",33 "lines": 304,34 "truncated": false,35 "block": 16,36 "row": 771337 },38 {39 "path": "config_template.py",40 "sha256": "8b5fd5723bcb2268745770168f74b01ab5ed622375b1029985cfed2d305187fc",41 "language": "Python",42 "lines": 27,43 "truncated": false,44 "block": 15,45 "row": 750246 },47 {48 "path": "figures/MAM2EBRAINS/M2E_compute_corrcoeff.py",49 "sha256": "9c675010288e34d86fb0a964608fa34edadc590d05ff8d6e521820acebbb7c47",50 "language": "Python",51 "lines": 64,52 "truncated": false,53 "block": 15,54 "row": 1185655 },56 {57 "path": "figures/MAM2EBRAINS/M2E_compute_fc.py",58 "sha256": "9d9d8ae15cca084f3415212b85e4a5bb2a99f71915fc2daf20f07abe1fa09291",59 "language": "Python",60 "lines": 50,61 "truncated": false,62 "block": 15,63 "row": 1004364 },65 {66 "path": "figures/MAM2EBRAINS/M2E_compute_pop_LvR.py",67 "sha256": "4144010ea2b97f146bd2abda562728adfc200f3504490cccdaff9539d75a2030",68 "language": "Python",69 "lines": 47,70 "truncated": false,71 "block": 15,72 "row": 931473 },74 {75 "path": "figures/MAM2EBRAINS/M2E_compute_pop_rates.py",76 "sha256": "22cb253b9bfb5dc4e64adee60f306ab7b6bb0a4c43d680f61c9c8d71a975c0e8",77 "language": "Python",78 "lines": 50,79 "truncated": false,80 "block": 15,81 "row": 1009482 },83 {84 "path": "figures/MAM2EBRAINS/M2E_compute_rate_time_series.py",85 "sha256": "54bda8940abbd12e92ba58b6e3ae79fa2ce54b3beb6c7177a3f960bf4a29b215",86 "language": "Python",87 "lines": 122,88 "truncated": false,89 "block": 15,90 "row": 1660891 },92 {93 "path": "figures/MAM2EBRAINS/M2E_compute_synaptic_input.py",94 "sha256": "5cf1ed9653566bb804eb30190498315fd2d31428b347e1a950561f2250e3c958",95 "language": "Python",96 "lines": 88,97 "truncated": false,98 "block": 15,99 "row": 12989100 },101 {102 "path": "figures/MAM2EBRAINS/M2E_firing_rate.py",103 "sha256": "261cd131a07a1009db8dc6741b0fccf202b75e5a8969e398b7b7909b599bde2f",104 "language": "Python",105 "lines": 101,106 "truncated": false,107 "block": 15,108 "row": 13633109 },110 {111 "path": "figures/MAM2EBRAINS/M2E_visualize_dynamics.py",112 "sha256": "7b468dc166201f1de90f8ced577f8d0a2e7ba82a6f6cc0f5d42df364209da94a",113 "language": "Python",114 "lines": 420,115 "truncated": false,116 "block": 15,117 "row": 24075118 },119 {120 "path": "figures/MAM2EBRAINS/M2E_visualize_fc.py",121 "sha256": "2f719289e57022f3c999ae01a64e6d102abbbf9b7870ace3bd8c82e3b33a18ac",122 "language": "Python",123 "lines": 190,124 "truncated": false,125 "block": 15,126 "row": 17965127 },128 {129 "path": "figures/MAM2EBRAINS/M2E_visualize_interareal_connectivity.py",130 "sha256": "b74a1732094142f1b7972c7b645d013a2e80297fbb65d31f4caf8f7b381bbb57",131 "language": "Python",132 "lines": 137,133 "truncated": false,134 "block": 15,135 "row": 16425136 },137 {138 "path": "figures/MAM2EBRAINS/M2E_visualize_time_ave_pop_rates.py",139 "sha256": "5a3e0084adc8ed54ec95d7b55ff478ed12068e1528fe62859dc78d4629171f00",140 "language": "Python",141 "lines": 77,142 "truncated": false,143 "block": 15,144 "row": 12979145 },146 {147 "path": "figures/MAM2EBRAINS/correlation_toolbox/correlation_analysis.py",148 "sha256": "137f7dd4e8fe8fd6cf3af92dfa22d95c5c865d5ec97b40d318871e4b9181982b",149 "language": "Python",150 "lines": 643,151 "truncated": false,152 "block": 15,153 "row": 25251154 },155 {156 "path": "figures/MAM2EBRAINS/correlation_toolbox/helper.py",157 "sha256": "2212c4375dc5312c83f5abb4d9db59e468ea8ace523c4695a03b63b12362ea78",158 "language": "Python",159 "lines": 266,160 "truncated": false,161 "block": 15,162 "row": 20742163 },164 {165 "path": "figures/Schmidt2018/Fig2_anatomy.py",166 "sha256": "e9283db0bc7d90c5bc7c675a343ac32e42faaa2bab6e9f22117c15d9d5db2036",167 "language": "Python",168 "lines": 243,169 "truncated": false,170 "block": 15,171 "row": 21230172 },173 {174 "path": "figures/Schmidt2018/Fig3_construction.py",175 "sha256": "a63fcec4b7d2a283aa06323a5e2b904173b3425277a44eaf1238dfd9d20c31d3",176 "language": "Python",177 "lines": 101,178 "truncated": false,179 "block": 15,180 "row": 13696181 },182 {183 "path": "figures/Schmidt2018/Fig4_connectivity.py",184 "sha256": "d3f61b1bbc24e7a79eaaeecc658a2daaa89acc6b2b1e8050f9f76145ba4aa082",185 "language": "Python",186 "lines": 237,187 "truncated": false,188 "block": 15,189 "row": 19614190 },191 {192 "path": "figures/Schmidt2018/Fig5_cc_laminar_pattern.py",193 "sha256": "187cc49a4ca49e62b4217d7961e571998f6ab0baeb25e8c5c9a8549db612ff1e",194 "language": "Python",195 "lines": 312,196 "truncated": false,197 "block": 15,198 "row": 22661199 },200 {201 "path": "figures/Schmidt2018/Fig6_connectivity_measures.py",202 "sha256": "24feedc04007f217fa8cd982116119c282185144a02ea8154fe3a8dc381a8587",203 "language": "Python",204 "lines": 213,205 "truncated": false,206 "block": 15,207 "row": 18672208 },209 {210 "path": "figures/Schmidt2018/Fig7_community_structure.py",211 "sha256": "d97c8670feba0b3d674da9297251ba9c9a61c1a91248aabc51ab141e0ade7d5c",212 "language": "Python",213 "lines": 123,214 "truncated": false,215 "block": 15,216 "row": 15016217 },218 {219 "path": "figures/Schmidt2018/Fig8_laminar_paths.py",220 "sha256": "d7e5c0b07075c8b55cc4eb5eed89a098c05eb0d37c2496d0ac773ef467ad790f",221 "language": "Python",222 "lines": 431,223 "truncated": false,224 "block": 15,225 "row": 23744226 },227 {228 "path": "figures/Schmidt2018/graph_helpers.py",229 "sha256": "7678807d8218142340be95e7d1fa2262421a3fd91f32dc811fbb742a7acf8cd4",230 "language": "Python",231 "lines": 374,232 "truncated": false,233 "block": 15,234 "row": 22685235 },236 {237 "path": "figures/Schmidt2018/helpers.py",238 "sha256": "d2b9844b7fb7e98e028a74f3905884a19b6d4cd514095a2f921fc4d22720bdaf",239 "language": "Python",240 "lines": 164,241 "truncated": false,242 "block": 15,243 "row": 18123244 },245 {246 "path": "figures/Schmidt2018/plotcolors.py",247 "sha256": "1cff9c3e52002b8bd68a4a7c4c8af663790fa298723cfc4b13edd2952295073b",248 "language": "Python",249 "lines": 15,250 "truncated": false,251 "block": 15,252 "row": 7243253 },254 {255 "path": "figures/Schmidt2018/plotfuncs.py",256 "sha256": "20ec09cf49148c95d3cd76c19d8fe5682f8aba3cf7412041ee7755aa1bdacfa1",257 "language": "Python",258 "lines": 195,259 "truncated": false,260 "block": 15,261 "row": 20124262 },263 {264 "path": "figures/Schmidt2018/tex/compile_tex.sh",265 "sha256": "5fe433114d7f2188fde3f4c4893064f0fbb291b8d140cf0c05f7193aa45779b6",266 "language": "Shell",267 "lines": 11,268 "truncated": false,269 "block": 16,270 "row": 4710271 },272 {273 "path": "figures/Schmidt2018_dyn/Fig2_bistability.py",274 "sha256": "ea38d777db50c4e934b778ad723c2ffbd80c99b37111b4417770423817e0e5f9",275 "language": "Python",276 "lines": 102,277 "truncated": false,278 "block": 15,279 "row": 13817280 },281 {282 "path": "figures/Schmidt2018_dyn/Fig3_ground_state_chi1.py",283 "sha256": "d6c00e360a8720921424d61fafe6170dc924c8808789a520073b0da653f31607",284 "language": "Python",285 "lines": 382,286 "truncated": false,287 "block": 15,288 "row": 22806289 },290 {291 "path": "figures/Schmidt2018_dyn/Fig4_metastability.py",292 "sha256": "bae23c97f5babe47a6f5c3004df2d66fb4321a9be9d230d8ef626e1a3d944d17",293 "language": "Python",294 "lines": 311,295 "truncated": false,296 "block": 15,297 "row": 21941298 },299 {300 "path": "figures/Schmidt2018_dyn/Fig4_theory.py",301 "sha256": "4e896289d0d3f9be608f1084247cf8a764a5a65a9174b5d7d9b6e8803618321b",302 "language": "Python",303 "lines": 38,304 "truncated": false,305 "block": 15,306 "row": 8761307 },308 {309 "path": "figures/Schmidt2018_dyn/Fig5_ground_state.py",310 "sha256": "ec20e22643a8d2276d7ec0828c4af42d086e651cf7389c8dd9482e690f7bc6fe",311 "language": "Python",312 "lines": 383,313 "truncated": false,314 "block": 15,315 "row": 22876316 },317 {318 "path": "figures/Schmidt2018_dyn/Fig6_comparison_exp_spiking_data.py",319 "sha256": "e1929c03b06a854e75c20a95faa901e4d03ab06c2e63c0ed451ccd07aab953f1",320 "language": "Python",321 "lines": 303,322 "truncated": false,323 "block": 15,324 "row": 22110325 },326 {327 "path": "figures/Schmidt2018_dyn/Fig7_temporal_hierarchy.py",328 "sha256": "f9161200ce0b9cef525cea52f5ecc5545857b0607f0a90899e19208602df90a4",329 "language": "Python",330 "lines": 669,331 "truncated": false,332 "block": 15,333 "row": 25151334 },335 {336 "path": "figures/Schmidt2018_dyn/Fig8_interactions.py",337 "sha256": "fff9721fcb28be78990a275eec9db27f8d36d59d2f8e2c8a40c69c28b2801b6b",338 "language": "Python",339 "lines": 388,340 "truncated": false,341 "block": 15,342 "row": 22875343 },344 {345 "path": "figures/Schmidt2018_dyn/Fig9_laminar_interactions.py",346 "sha256": "2e2facab8e217c44f83674e0faee6e5ca5cbe935926ebcee70419722b4aa27c7",347 "language": "Python",348 "lines": 286,349 "truncated": false,350 "block": 15,351 "row": 21517352 },353 {354 "path": "figures/Schmidt2018_dyn/Fig9_path_analysis.py",355 "sha256": "b9480625c1a246c594a86ac1a0133f4fafa3878ce25e8156dca74392d812f483",356 "language": "Python",357 "lines": 169,358 "truncated": false,359 "block": 15,360 "row": 19032361 },362 {363 "path": "figures/Schmidt2018_dyn/Fig9_significant_channels.py",364 "sha256": "3cfc1191513736a847b5fdb60664f9d8b557758ad502636905585e8654ade607",365 "language": "Python",366 "lines": 103,367 "truncated": false,368 "block": 15,369 "row": 15205370 },371 {372 "path": "figures/Schmidt2018_dyn/compute_bold_signal.R",373 "sha256": "faee7f36227e5643109dae8b50fc57df258cdb627e23bc44fb9b64e33f53248c",374 "language": "R",375 "lines": 12,376 "truncated": false,377 "block": 16,378 "row": 1911379 },380 {381 "path": "figures/Schmidt2018_dyn/compute_bold_signal.py",382 "sha256": "7d91e8d0dece40b58c9ec4daf619a0d5c3d04b9d3fb7f229c6abda128916f77f",383 "language": "Python",384 "lines": 64,385 "truncated": false,386 "block": 15,387 "row": 9739388 },389 {390 "path": "figures/Schmidt2018_dyn/compute_corrcoeff.py",391 "sha256": "c97f4ff2fdf558939026bf031f6f43c19c16e652111b1b1d73143287ad3c4ed4",392 "language": "Python",393 "lines": 63,394 "truncated": false,395 "block": 15,396 "row": 10456397 },398 {399 "path": "figures/Schmidt2018_dyn/compute_cross_correlation.py",400 "sha256": "7fb730815697caa5e0eb80fbe4b718afcdb48b1c3f566001189c0c55927c6858",401 "language": "Python",402 "lines": 71,403 "truncated": false,404 "block": 15,405 "row": 11348406 },407 {408 "path": "figures/Schmidt2018_dyn/compute_functional_connectivity.py",409 "sha256": "f0b0b907c7852f19bd10c13dd5abc1e8158d931632d55e3c84f1a3bebc61a7b5",410 "language": "Python",411 "lines": 47,412 "truncated": false,413 "block": 15,414 "row": 9032415 },416 {417 "path": "figures/Schmidt2018_dyn/compute_granger_causality.py",418 "sha256": "ec2f34998d1022ec1ca18afa648c631ccb5237d491eb8198dcb6556643958042",419 "language": "Python",420 "lines": 158,421 "truncated": false,422 "block": 15,423 "row": 18167424 },425 {426 "path": "figures/Schmidt2018_dyn/compute_louvain_communities.py",427 "sha256": "56a2a07514042e63010f1a4c6435626b45909bce587f1f9b98be014943c4f7a9",428 "language": "Python",429 "lines": 82,430 "truncated": false,431 "block": 15,432 "row": 11214433 },434 {435 "path": "figures/Schmidt2018_dyn/compute_pop_LvR.py",436 "sha256": "39c535cae195b3c2aacc5513cbad83457aca8f1707e9aaeda2c1b6070f74b54b",437 "language": "Python",438 "lines": 52,439 "truncated": false,440 "block": 15,441 "row": 9223442 },443 {444 "path": "figures/Schmidt2018_dyn/compute_pop_rates.py",445 "sha256": "58d468a83197dd2d2d756ab1d36f53f8d2eb5ec071a1707539ecebbd80b9ecd8",446 "language": "Python",447 "lines": 55,448 "truncated": false,449 "block": 15,450 "row": 9572451 },452 {453 "path": "figures/Schmidt2018_dyn/compute_power_spectrum.py",454 "sha256": "a405ea3fe93f1f9eed852c1f6d70614fccf98793f2aee61dcdd6595448bff7d5",455 "language": "Python",456 "lines": 69,457 "truncated": false,458 "block": 15,459 "row": 11326460 },461 {462 "path": "figures/Schmidt2018_dyn/compute_rate_histogram.py",463 "sha256": "f2bb7c099d15046cda21c340c7f38792580d0bb61d99a78a48ded1da6cf9190f",464 "language": "Python",465 "lines": 80,466 "truncated": false,467 "block": 15,468 "row": 11406469 },470 {471 "path": "figures/Schmidt2018_dyn/compute_rate_time_series.py",472 "sha256": "e3d529549791db1c59351e2620e6920c1e8c2ecbe42a11ee31bdeefcc6bebb54",473 "language": "Python",474 "lines": 129,475 "truncated": false,476 "block": 15,477 "row": 15851478 },479 {480 "path": "figures/Schmidt2018_dyn/compute_synaptic_input.py",481 "sha256": "e05bcd28ad27f21f62a9d50ba8a7dbd9549b598cd75fbc1baec43c8f94625546",482 "language": "Python",483 "lines": 99,484 "truncated": false,485 "block": 15,486 "row": 13288487 },488 {489 "path": "figures/Schmidt2018_dyn/helpers.py",490 "sha256": "54e344f85c8cdc46e9af209ec058d0b777f61602fa40b364f4b08d34296f27e0",491 "language": "Python",492 "lines": 120,493 "truncated": false,494 "block": 15,495 "row": 16169496 },497 {498 "path": "figures/Schmidt2018_dyn/matrix_plot.py",499 "sha256": "42cd5322e39dcf87d7a2965f16b19c18289ff6d6379d100f4bc022ae06616e7d",500 "language": "Python",501 "lines": 175,502 "truncated": false,503 "block": 15,504 "row": 18978505 },506 {507 "path": "figures/Schmidt2018_dyn/network_simulations.py",508 "sha256": "7e9cccf57250cd5882e9d59587227049710cceac1cf548196447e4f07ca27c5e",509 "language": "Python",510 "lines": 216,511 "truncated": false,512 "block": 15,513 "row": 20420514 },515 {516 "path": "figures/Schmidt2018_dyn/plotcolors.py",517 "sha256": "1cff9c3e52002b8bd68a4a7c4c8af663790fa298723cfc4b13edd2952295073b",518 "language": "Python",519 "lines": 15,520 "truncated": false,521 "block": 15,522 "row": 7243523 },524 {525 "path": "figures/Schmidt2018_dyn/plotfuncs.py",526 "sha256": "d3425f622cc3a6a27f2f24c97053f006d7649193acc3c1449e157c3ea12f487a",527 "language": "Python",528 "lines": 188,529 "truncated": false,530 "block": 15,531 "row": 19857532 },533 {534 "path": "figures/Schmidt2018_dyn/process_chu2014_data.py",535 "sha256": "e874607b61dd688e0802d67283424990efeae1b8063eae36f1dfcb317be15c7c",536 "language": "Python",537 "lines": 189,538 "truncated": false,539 "block": 15,540 "row": 17517541 },542 {543 "path": "figures/SchueckerSchmidt2017/Fig2_EE_example.py",544 "sha256": "a0f3cc130a138554d28f05f323791950ef0e437a8af4112df3866350cfe51d63",545 "language": "Python",546 "lines": 470,547 "truncated": false,548 "block": 15,549 "row": 23887550 },551 {552 "path": "figures/SchueckerSchmidt2017/Fig2_EE_network.py",553 "sha256": "3e832abf65fc424f8bb681fcf28c6bb963ceadabd5574a933197c8e058eff3ea",554 "language": "Python",555 "lines": 166,556 "truncated": false,557 "block": 15,558 "row": 19696559 },560 {561 "path": "figures/SchueckerSchmidt2017/Fig3_bistability.py",562 "sha256": "dbcbc09b510709731715983c3b38814eb9455b11bdc37b5d6d19d6628bbcf03f",563 "language": "Python",564 "lines": 149,565 "truncated": false,566 "block": 15,567 "row": 15821568 },569 {570 "path": "figures/SchueckerSchmidt2017/Fig4_meanfield_mam.py",571 "sha256": "d6346e71d7523a16261c31700d331c4ae280725c2dcc0d88e4e80ae1af355402",572 "language": "Python",573 "lines": 185,574 "truncated": false,575 "block": 15,576 "row": 18075577 },578 {579 "path": "figures/SchueckerSchmidt2017/Fig5_eigenspace.py",580 "sha256": "e068d238bc130f85fa485115a91f5ad7b46441ff93b74626a3c8f131629b7010",581 "language": "Python",582 "lines": 280,583 "truncated": false,584 "block": 15,585 "row": 21437586 },587 {588 "path": "figures/SchueckerSchmidt2017/Fig6_unstable_FP.py",589 "sha256": "d67bb517b68bb28a8f362ea140920663d8706cf81e2555b7e66740721c7615a3",590 "language": "Python",591 "lines": 79,592 "truncated": false,593 "block": 15,594 "row": 11324595 },596 {597 "path": "figures/SchueckerSchmidt2017/Fig7_stabilization_analysis.py",598 "sha256": "48322101b7a816f6c3b18ed6b89167388af3afb847ed9931f86814aabbb20d8f",599 "language": "Python",600 "lines": 238,601 "truncated": false,602 "block": 15,603 "row": 20243604 },605 {606 "path": "figures/SchueckerSchmidt2017/Fig8_conn_analysis.py",607 "sha256": "0143ad9bb29e9dfcc56d35cb8e644215dba7f869d350ea8066b55fb1de88f9f2",608 "language": "Python",609 "lines": 478,610 "truncated": false,611 "block": 15,612 "row": 23968613 },614 {615 "path": "figures/SchueckerSchmidt2017/Fig9_simulation.py",616 "sha256": "773d2db7297717553c3e30fd0433cd102f38f80cd77a6adddfa8fdc05953cfaa",617 "language": "Python",618 "lines": 141,619 "truncated": false,620 "block": 15,621 "row": 15514622 },623 {624 "path": "figures/SchueckerSchmidt2017/plotcolors.py",625 "sha256": "f62949c56d2ff7d852e8a8853fb1bbd7587d7dea71a45110d047ec4c31047883",626 "language": "Python",627 "lines": 4,628 "truncated": false,629 "block": 15,630 "row": 5978631 },632 {633 "path": "figures/SchueckerSchmidt2017/plotfuncs.py",634 "sha256": "810de8abe7271efb255ec59906cf7e8a2a21fd9a74a5900277bbdaa86119f9c1",635 "language": "Python",636 "lines": 188,637 "truncated": false,638 "block": 15,639 "row": 19856640 },641 {642 "path": "figures/SchueckerSchmidt2017/rate_matrix_plot.py",643 "sha256": "e288f1c0f563d403ca182e7ecb65eadc2b1bf03105acf847f7eba8a5dde04ade",644 "language": "Python",645 "lines": 163,646 "truncated": false,647 "block": 15,648 "row": 18570649 },650 {651 "path": "figures/SchueckerSchmidt2017/stabilization.py",652 "sha256": "6d8e5fafd4c4ca3b74837249e7b55d29ee721bc581ee0db2ea940c6143e0eb6a",653 "language": "Python",654 "lines": 112,655 "truncated": false,656 "block": 15,657 "row": 15968658 },659 {660 "path": "figures/SchueckerSchmidt2017/utils.py",661 "sha256": "94fafba5f2e15051bf4839fe1966f749ce1900c7fd8c88e8a2185584a897dbca",662 "language": "Python",663 "lines": 146,664 "truncated": false,665 "block": 15,666 "row": 16442667 },668 {669 "path": "multi-area-model.ipynb",670 "sha256": "9223fa2d7f82c6bf0ebc085c0fa7d9ec945a70b702ee20682c25545fa74ddd4f",671 "language": "Jupyter",672 "lines": 362,673 "truncated": false,674 "block": 14,675 "row": 16405676 },677 {678 "path": "multiarea_model/__init__.py",679 "sha256": "7fd941ab65458c7dd222a6bc6b367e595d38d003b01c0c7539da88807799466d",680 "language": "Python",681 "lines": 5,682 "truncated": false,683 "block": 15,684 "row": 5976685 },686 {687 "path": "multiarea_model/analysis.py",688 "sha256": "8a9785c0deae1e5cf26d90fdee95c082c8ed359bb816f6497ad89e9f672d7524",689 "language": "Python",690 "lines": 973,691 "truncated": false,692 "block": 16,693 "row": 1063694 },695 {696 "path": "multiarea_model/analysis_helpers.py",697 "sha256": "82a3265e2752ef9ccaa2a211089529779e43a28cbdf75779629a58409c84fa8d",698 "language": "Python",699 "lines": 814,700 "truncated": false,701 "block": 16,702 "row": 19703 },704 {705 "path": "multiarea_model/data_multiarea/Model.py",706 "sha256": "b9c014c518a12251795e0f803eeb5eb9b012035ab7d5a4f3a3dc22c22d5b859a",707 "language": "Python",708 "lines": 1007,709 "truncated": false,710 "block": 16,711 "row": 1045712 },713 {714 "path": "multiarea_model/data_multiarea/SLN_logdensities.R",715 "sha256": "a43e33f8f989210791314b14cf443e087c74a3e838e86b45dd29f68d1987a7f9",716 "language": "R",717 "lines": 14,718 "truncated": false,719 "block": 16,720 "row": 1964721 },722 {723 "path": "multiarea_model/data_multiarea/VisualCortex_Data.py",724 "sha256": "6d841ce0a8621457d848f5e920c7932dd4d8bde99294b9695ad25aaea1852382",725 "language": "Python",726 "lines": 1382,727 "truncated": false,728 "block": 16,729 "row": 1334730 },731 {732 "path": "multiarea_model/data_multiarea/bbAlt.R",733 "sha256": "aece136ecf7819c39c797234597e213fb922750977e10cbe8413c67ad8c3df83",734 "language": "R",735 "lines": 289,736 "truncated": false,737 "block": 16,738 "row": 3729739 },740 {741 "path": "multiarea_model/default_params.py",742 "sha256": "5ed78cb1ebb354e82351887febb56a4207ea500886d8f52aa3a13827be1cc4aa",743 "language": "Python",744 "lines": 318,745 "truncated": false,746 "block": 15,747 "row": 22102748 },749 {750 "path": "multiarea_model/multiarea_helpers.py",751 "sha256": "20bf567a8d2018d7c4f5b3e253cf06315d0e495aa097d3b035e57613f5c08465",752 "language": "Python",753 "lines": 548,754 "truncated": false,755 "block": 15,756 "row": 25137757 },758 {759 "path": "multiarea_model/multiarea_model.py",760 "sha256": "0450bb947ba682693afc6c6e47f7212d971410e79115cc9e6fc13108d115494c",761 "language": "Python",762 "lines": 315,763 "truncated": false,764 "block": 15,765 "row": 23454766 },767 {768 "path": "multiarea_model/simulation.py",769 "sha256": "b896c276edbf223403a15f9cb8e9619f389d6c11775dcbb25f32dcd8e1733ffb",770 "language": "Python",771 "lines": 724,772 "truncated": false,773 "block": 16,774 "row": 490775 },776 {777 "path": "multiarea_model/stabilize.py",778 "sha256": "b2eeaa0cdd9d485ae3d19fafad2c79ff4319cc277e6866cf44e2ef27afbd78fe",779 "language": "Python",780 "lines": 142,781 "truncated": false,782 "block": 15,783 "row": 17531784 },785 {786 "path": "multiarea_model/sumatra_helpers.py",787 "sha256": "bcb6cec908072f251c444e8c8e3840e925a4c1d032e6683fb58a78d384831ed3",788 "language": "Python",789 "lines": 78,790 "truncated": false,791 "block": 15,792 "row": 11283793 },794 {795 "path": "multiarea_model/theory.py",796 "sha256": "95ee1c81b2f64a744cd29ff51c28bc9fc31e87d65629fa6cb6b895bee585a59e",797 "language": "Python",798 "lines": 450,799 "truncated": false,800 "block": 15,801 "row": 25047802 },803 {804 "path": "multiarea_model/theory_helpers.py",805 "sha256": "fbcaf9e7e77fcc41f5193e3da05abc456e817196e7a68514a606354597445c4c",806 "language": "Python",807 "lines": 380,808 "truncated": false,809 "block": 15,810 "row": 22370811 },812 {813 "path": "run_example_downscaled.py",814 "sha256": "e6e4a07a6cae7ad115df1cd656de125be5fe524c088f95b0ba06643820648e77",815 "language": "Python",816 "lines": 36,817 "truncated": false,818 "block": 15,819 "row": 8693820 },821 {822 "path": "run_example_fullscale.py",823 "sha256": "2fac9ed8b1a4a227b18de29561141703591fb3a1d7f0d7b46536f8b826f82522",824 "language": "Python",825 "lines": 41,826 "truncated": false,827 "block": 15,828 "row": 8610829 },830 {831 "path": "run_simulation.py",832 "sha256": "247fa4afea1214ad3da52b4c3b4180a34d93e6cd13b4b6f159022e0255787208",833 "language": "Python",834 "lines": 37,835 "truncated": false,836 "block": 15,837 "row": 8091838 },839 {840 "path": "start_jobs.py",841 "sha256": "32bbd868f0e26b0a22de612956f6fc099ea4cabe1a54706ebe7ae8c2e780b326",842 "language": "Python",843 "lines": 87,844 "truncated": false,845 "block": 15,846 "row": 13596847 },848 {849 "path": "tests/test_analysis.py",850 "sha256": "97f159545e5159581a746d6c53c8b6f9013783deaf6446c7a0e55079337bfcb3",851 "language": "Python",852 "lines": 47,853 "truncated": false,854 "block": 15,855 "row": 10224856 },857 {858 "path": "tests/test_meanfield.py",859 "sha256": "0a1f7e6d95c2fa97726c144298bea8e3a245a4695ec2a087be85bb73d118719b",860 "language": "Python",861 "lines": 13,862 "truncated": false,863 "block": 15,864 "row": 6399865 },866 {867 "path": "tests/test_nest_network_connectivity.py",868 "sha256": "0d7a9e9ef490218f521c8b427d318c7d2fb04ebad85a7a6489d6f6ea57132dc0",869 "language": "Python",870 "lines": 58,871 "truncated": false,872 "block": 15,873 "row": 11994874 },875 {876 "path": "tests/test_network_initialization.py",877 "sha256": "d39f78ff947b4f020a668fcc7f48dc09c3a1cb9a05ac0047b6753d416f6d3b65",878 "language": "Python",879 "lines": 25,880 "truncated": false,881 "block": 15,882 "row": 7847883 },884 {885 "path": "tests/test_network_params.py",886 "sha256": "d51a33731b3c77313e04686698f4df79f197fc8e106b1f04bc2dc068630032bc",887 "language": "Python",888 "lines": 94,889 "truncated": false,890 "block": 15,891 "row": 14174892 },893 {894 "path": "tests/test_network_scaling.py",895 "sha256": "7fa978a81b5cae57746008869269eaec4e6a79eee64f39077da6dcb39acec61b",896 "language": "Python",897 "lines": 62,898 "truncated": false,899 "block": 15,900 "row": 11467901 },902 {903 "path": "tests/test_parameter_check.py",904 "sha256": "d6a1e8ef559d2c994c34742a041099a4badab81c638c3272eab2a5bd5584686f",905 "language": "Python",906 "lines": 31,907 "truncated": false,908 "block": 15,909 "row": 7438910 },911 {912 "path": "tests/test_replace_cc.py",913 "sha256": "29b62c1be4303f176a3bbc22b3b842e78b335ba9c0c882349379e6245c1d966a",914 "language": "Python",915 "lines": 89,916 "truncated": false,917 "block": 15,918 "row": 14456919 },920 {921 "path": "tests/test_simulate_V1.py",922 "sha256": "50baa38c2d2c8e8ae98b210022a15be98387ea4d3036c81fc1e40d860804b03b",923 "language": "Python",924 "lines": 54,925 "truncated": false,926 "block": 15,927 "row": 11156928 },929 {930 "path": "tests/test_stabilization.py",931 "sha256": "cde191cc66ed02c42cf531d64a60da55f1fb06dc774198c0881bd47a9d281cd0",932 "language": "Python",933 "lines": 30,934 "truncated": false,935 "block": 15,936 "row": 8543937 }938 ]939}