Team Ai
Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face
0likes5.6kdownloads
github.com__hsnpipeline__simplacecells.json327 linesDownload Raw Back to f3
1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/hsnpipeline/simplacecells",4 "url": "https://github.com/HSNPipeline/SimPlaceCells",5 "host": "github.com",6 "commit": "ce0d921f693478ab9324fa3a3e31a32c40d72fe6",7 "license": "MIT",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "FIGURES_SIM/FIGURE_1a_SimPlaceField.ipynb",13   "sha256": "cdd9f69279d68428fb0933f70076958c75bad180ebdff0a3756540b863674917",14   "language": "Jupyter",15   "lines": 102,16   "truncated": false,17   "block": 5,18   "row": 1626219  },20  {21   "path": "FIGURES_SIM/FIGURE_5a_PlaceFieldSimulation.ipynb",22   "sha256": "b5d8f80df0b44eaca3a0faa1c3d79f80c4fbd03640bf9a4f6acbb9f56ce3f344",23   "language": "Jupyter",24   "lines": 131,25   "truncated": false,26   "block": 5,27   "row": 1633628  },29  {30   "path": "FIGURES_SIM/FIGURE_5bc_SimParams.ipynb",31   "sha256": "9032889e3aa2117ca63676d5bf83a5b84839aaa9d4f2f199f8856107cb9861a0",32   "language": "Jupyter",33   "lines": 228,34   "truncated": false,35   "block": 5,36   "row": 1694737  },38  {39   "path": "FIGURES_SIM/FIGURE_6a_PlaceFieldParams.ipynb",40   "sha256": "d189798b7a84561e72874ff696cf2ff2d4732b88dd419ee5207dff3dc159b891",41   "language": "Jupyter",42   "lines": 148,43   "truncated": false,44   "block": 5,45   "row": 1661746  },47  {48   "path": "FIGURES_SIM/FIGURE_6bc_ParamsMethods.ipynb",49   "sha256": "6afb56f7d9a7e4872160f8c0ac817fe2cf1bd8853f02f71faeff55b323d2f48a",50   "language": "Jupyter",51   "lines": 294,52   "truncated": false,53   "block": 5,54   "row": 1772955  },56  {57   "path": "FIGURES_SIM/FIGURE_FeatureEstimate.ipynb",58   "sha256": "8aec7df90fe6576577b18b5d2ce2df1729bf4b6fb110e69b6dce0aaf0e9b4649",59   "language": "Jupyter",60   "lines": 409,61   "truncated": false,62   "block": 6,63   "row": 31364  },65  {66   "path": "FIGURES_SIM/FIGURE_PCA.ipynb",67   "sha256": "b932a5c0b4b62a52aba0de4a69f8495046f6655e9685429090929eb9b7e7869b",68   "language": "Jupyter",69   "lines": 292,70   "truncated": false,71   "block": 5,72   "row": 1741873  },74  {75   "path": "FIGURES_SIM/Figure_Supplement_2D.ipynb",76   "sha256": "73cfd2c2c4022e84bf837c8a96c49af8b17fe1f900ed457dbfc78470ca00c6b3",77   "language": "Jupyter",78   "lines": 791,79   "truncated": false,80   "block": 6,81   "row": 101982  },83  {84   "path": "INTRO_SIM/00-Sim_PlaceField_Components.ipynb",85   "sha256": "676823137d4ab38c65f9296d767d799641af746366ee7b2fec034a0f64968b6d",86   "language": "Jupyter",87   "lines": 123,88   "truncated": false,89   "block": 5,90   "row": 1642091  },92  {93   "path": "INTRO_SIM/01-Sim_PeakModels.ipynb",94   "sha256": "0c3c8072769245d6f78ad151bbac452a988a0a66f4e6f6b3e53d24f1db0ff779",95   "language": "Jupyter",96   "lines": 128,97   "truncated": false,98   "block": 5,99   "row": 16513100  },101  {102   "path": "INTRO_SIM/02-Sim_PlaceFields.ipynb",103   "sha256": "1e002fec22e4fdb76fecf1593c5f8183650a6eb77fbe988f46ed439db97a519c",104   "language": "Jupyter",105   "lines": 89,106   "truncated": false,107   "block": 5,108   "row": 16285109  },110  {111   "path": "INTRO_SIM/03-Sim_Trials.ipynb",112   "sha256": "eb90ba073963325a711e58e35e4d1391ddee31c287eef6800989e4cc58953ee1",113   "language": "Jupyter",114   "lines": 93,115   "truncated": false,116   "block": 5,117   "row": 16283118  },119  {120   "path": "INTRO_SIM/04-Sim_Cells_wParam_Updates.ipynb",121   "sha256": "32e6da4ac1b9c89f6ebb37edd3b5ceeb7b052c2ae6642f78e3bc8988c0c5310d",122   "language": "Jupyter",123   "lines": 175,124   "truncated": false,125   "block": 5,126   "row": 16926127  },128  {129   "path": "INTRO_SIM/A1_2D_SimPlaceField_Components.ipynb",130   "sha256": "f5ceea74e11ccc3d0e1512ce05c9d98c728f412f40528eaefaf089f207ef99a3",131   "language": "Jupyter",132   "lines": 227,133   "truncated": false,134   "block": 5,135   "row": 17059136  },137  {138   "path": "LICENSE",139   "sha256": "4e3b34d1f9ff1b6a9bbae9b257c96d47d1413e0ee126589c96679d7b3e4eb811",140   "language": "License",141   "lines": 21,142   "truncated": false,143   "block": 6,144   "row": 1810145  },146  {147   "path": "README.md",148   "sha256": "42de20b019fa0373d1d8aac747c20e2068dcb203a84ce33db7616ee404ec6e83",149   "language": "Text",150   "lines": 114,151   "truncated": false,152   "block": 8,153   "row": 10228154  },155  {156   "path": "code/models.py",157   "sha256": "418e3e85729896cb410ea04ab4a7c6a873f38af06cfd55abc8f09b19776dba0c",158   "language": "Python",159   "lines": 15,160   "truncated": false,161   "block": 6,162   "row": 23465163  },164  {165   "path": "code/plts/cell.py",166   "sha256": "d86c0d5c958a6c1977e679eba87e2432664733868274747ba0fb1089021b5c26",167   "language": "Python",168   "lines": 90,169   "truncated": false,170   "block": 6,171   "row": 34618172  },173  {174   "path": "code/plts/firingrate.py",175   "sha256": "01cccce6e592ae47484223324f2454a92addfe06bdf31627800162ee5c622b18",176   "language": "Python",177   "lines": 16,178   "truncated": false,179   "block": 6,180   "row": 22334181  },182  {183   "path": "code/plts/methods.py",184   "sha256": "9cdad2296e038c729239e35071750ee0cdd5bb9380e23d06a8f5e57d4bc178ff",185   "language": "Python",186   "lines": 17,187   "truncated": false,188   "block": 6,189   "row": 23862190  },191  {192   "path": "code/plts/pca.py",193   "sha256": "a97108d12b65af9176ac781d4e92070e1d4a72f59a9d5cc0750df7907a8520e4",194   "language": "Python",195   "lines": 148,196   "truncated": false,197   "block": 6,198   "row": 39955199  },200  {201   "path": "code/plts/settings.py",202   "sha256": "e8b9151a6554b083ce244d7865e03b34dbf108fa13105a90e051784755b94ed3",203   "language": "Python",204   "lines": 64,205   "truncated": false,206   "block": 6,207   "row": 31054208  },209  {210   "path": "code/plts/stats.py",211   "sha256": "fdfd91f767af965d59ee122f169d396fb559c1d3b377c31d4a9583697c5656e1",212   "language": "Python",213   "lines": 22,214   "truncated": false,215   "block": 6,216   "row": 23985217  },218  {219   "path": "code/plts/trial.py",220   "sha256": "719e423c96bf12a748ebc005add6f7e080792c94e4e6339789fc49d0dcc32288",221   "language": "Python",222   "lines": 99,223   "truncated": false,224   "block": 6,225   "row": 39101226  },227  {228   "path": "code/sim/cells.py",229   "sha256": "b25a49eb1f4240edb41b41f8413b5f2a1abd5d7df6c60d80df068c20dacda410",230   "language": "Python",231   "lines": 283,232   "truncated": false,233   "block": 7,234   "row": 3223235  },236  {237   "path": "code/sim/config.py",238   "sha256": "3b5eb3ae5a74a616f60a78cd1f2546d83a9f3d4388ea541d157141649a6e2c78",239   "language": "Python",240   "lines": 173,241   "truncated": false,242   "block": 6,243   "row": 42011244  },245  {246   "path": "code/sim/noise.py",247   "sha256": "411a3e39a623cc1c99f4a9c89c4f3458e50724fbb4b8f4ce51dbb4ef182ad81b",248   "language": "Python",249   "lines": 115,250   "truncated": false,251   "block": 6,252   "row": 34222253  },254  {255   "path": "code/sim/occupancy.py",256   "sha256": "a5f9eda3b2d4c05277cf697b4bd1d311427be6cd08b0414f4bf11658690e893b",257   "language": "Python",258   "lines": 40,259   "truncated": false,260   "block": 6,261   "row": 27167262  },263  {264   "path": "code/sim/param_vals.py",265   "sha256": "3b2ce03eca2974cd462da583d1bf2aa05ba8d8ff3df26574231af05f79495756",266   "language": "Python",267   "lines": 57,268   "truncated": false,269   "block": 6,270   "row": 31571271  },272  {273   "path": "code/sim/params.py",274   "sha256": "e8a335e2cdc8f4b7ae3db15eeaf91e93179bf29fd96f93c90c22349ec222a40d",275   "language": "Python",276   "lines": 122,277   "truncated": false,278   "block": 6,279   "row": 39300280  },281  {282   "path": "code/sim/peak.py",283   "sha256": "60644d9a9520cf6742a6307b72d8b1f458eecb927f3973e91a16007b8d5882db",284   "language": "Python",285   "lines": 179,286   "truncated": false,287   "block": 6,288   "row": 42748289  },290  {291   "path": "code/sim/placefield.py",292   "sha256": "642640f785cc1434daa71392cc55506520f39f27b5367e6f425e0cfe9e4dde54",293   "language": "Python",294   "lines": 207,295   "truncated": false,296   "block": 6,297   "row": 43102298  },299  {300   "path": "code/sim/trials.py",301   "sha256": "0ee82df39625eee1bb9decbaa51450a7646e904c689c992ed890022b1a86ec49",302   "language": "Python",303   "lines": 557,304   "truncated": false,305   "block": 7,306   "row": 8627307  },308  {309   "path": "code/utils/feature_settings.py",310   "sha256": "dc5a68ebeef5ceed13e077d66a545d92f0a64f2f5c88f4c31e43d2faeb69f510",311   "language": "Python",312   "lines": 17,313   "truncated": false,314   "block": 6,315   "row": 22609316  },317  {318   "path": "code/utils/utils.py",319   "sha256": "6a6700ceb22506c1df6a0fd2d3b4a7517e8555fd9e51323ea3d0892463644064",320   "language": "Python",321   "lines": 178,322   "truncated": false,323   "block": 6,324   "row": 45030325  }326 ]327}