Datasetpublic

OpenScientificCodeRegistry/Database

Open Scientific Code Registry (OSCR): the authors' scripts The code published by the authors of open-access neuroscience papers, as found and verified by Open Scientific Code Registry (OSCR). Each file is here exactly as it is at the source, at the verified commit, under the license of its repository. 421,275 unique files (3,782 MB of text) from 8,849 repositories, in 24 Parquet block(s). Only files whose repository's license allows redistribution, confirmed by the repository's… See the full description on the dataset page: https://huggingface.co/datasets/OpenScientificCodeRegistry/Database.

sourceHugging Faceotherupdated 2d agoView on Hugging Face

0likes5.6kdownloads

rootmanifestsfagithub.com__mayukhmondal__abc-dls.json

github.com__mayukhmondal__abc-dls.json273 linesDownload Raw Back to fa

1{2 "format": "oscr-script-manifest/1",3 "repository": "github.com/mayukhmondal/abc-dls",4 "url": "https://github.com/mayukhmondal/ABC-DLS",5 "host": "github.com",6 "commit": "05d9574f1c62deb7123609d6d11fc6a105fc7dc7",7 "license": "GPL-3.0",8 "license_confirmed_by": "license file LICENSE",9 "redistribution": "yes",10 "files": [11  {12   "path": "LICENSE",13   "sha256": "3972dc9744f6499f0f9b2dbf76696f2ae7ad8af9b23dde66d6af86c9dfb36986",14   "language": "License",15   "lines": 674,16   "truncated": false,17   "block": 1,18   "row": 223519  },20  {21   "path": "README.md",22   "sha256": "74d85957733ddcd3e2642a650697ab57a56ffe3ab9ed9ad2ebff89d296f9dd1d",23   "language": "Text",24   "lines": 74,25   "truncated": false,26   "block": 21,27   "row": 307428  },29  {30   "path": "doc/conf.py",31   "sha256": "228ef081c6b015a3f3313c39bc1383ac4e15462671af51d69a443276f6c1f9dc",32   "language": "Python",33   "lines": 57,34   "truncated": false,35   "block": 20,36   "row": 1569637  },38  {39   "path": "src/Classes/ABC.py",40   "sha256": "4f8f45afd6ad4815b63dad9276918ad93fcb2557d7fd4a956c1ccfc6c75a151c",41   "language": "Python",42   "lines": 3085,43   "truncated": false,44   "block": 21,45   "row": 53846  },47  {48   "path": "src/Classes/Misc.py",49   "sha256": "84cfccbd29f747ce62841d6b5f8f092a42c2ecb040f4a2e8ee8e90b809927c03",50   "language": "Python",51   "lines": 320,52   "truncated": false,53   "block": 20,54   "row": 2031455  },56  {57   "path": "src/Classes/shuffle.py",58   "sha256": "061bed2fa555f0191cb121be01b89844a6efd987fd13ca47a02bf423b8b6f15d",59   "language": "Python",60   "lines": 74,61   "truncated": false,62   "block": 20,63   "row": 1647364  },65  {66   "path": "src/Run_Classification.py",67   "sha256": "0ced3785ce3526f63ebe5852f0753f2f56890dc82797f6d738123f5e9c9e4f2a",68   "language": "Python",69   "lines": 155,70   "truncated": false,71   "block": 20,72   "row": 2016673  },74  {75   "path": "src/Run_ParamsEstimation.py",76   "sha256": "f4d15976e63275dcb1a077c424762e4c3ad01f782ed2ebc29f45e71d1a0d2cb2",77   "language": "Python",78   "lines": 207,79   "truncated": false,80   "block": 20,81   "row": 2062282  },83  {84   "path": "src/Run_SMC.py",85   "sha256": "cc1f19c8eb16f57444dd06399b2261ae61c8361cb8d5e1d89d0aa544022f1cdc",86   "language": "Python",87   "lines": 220,88   "truncated": false,89   "block": 20,90   "row": 2110391  },92  {93   "path": "src/SFS/Class.py",94   "sha256": "a643cd4db70b3794cef74688fcf8404ed12a3f00ef6fb0bca6d18e75987751e4",95   "language": "Python",96   "lines": 863,97   "truncated": false,98   "block": 21,99   "row": 327100  },101  {102   "path": "src/SFS/Demography.py",103   "sha256": "3595864a6cd177529a8f4b8b392921f2bef4e5e7e44bb3f49c4c2aacc10cf438",104   "language": "Python",105   "lines": 1176,106   "truncated": false,107   "block": 21,108   "row": 437109  },110  {111   "path": "src/SFS/Run_Prior2SFS.py",112   "sha256": "28748a26d8829b8261a4124a253731e43a6efa1bcbf7ed9881bf3d7b638f7c13",113   "language": "Python",114   "lines": 56,115   "truncated": false,116   "block": 20,117   "row": 16744118  },119  {120   "path": "src/SFS/Run_Range2UniParameters.py",121   "sha256": "c7becaaa71fb6ff701ec403013aa455f54e743030578409199a6dee62259d80b",122   "language": "Python",123   "lines": 32,124   "truncated": false,125   "block": 20,126   "row": 14883127  },128  {129   "path": "src/SFS/Run_SFS_to_SFS2c.py",130   "sha256": "8982ab771da5f8cc941a9aa2d1df1c42c250038f18d4c82ef4091f44d026f16e",131   "language": "Python",132   "lines": 40,133   "truncated": false,134   "block": 20,135   "row": 15167136  },137  {138   "path": "src/SFS/Run_VCF2SFS.py",139   "sha256": "317c4ae751ed6a974b03b60dbacf02122ecaf4953a4a0a8bfac0ccd18e37a749",140   "language": "Python",141   "lines": 38,142   "truncated": false,143   "block": 20,144   "row": 15215145  },146  {147   "path": "src/SFS/_version.py",148   "sha256": "14cf7c227bf6b7bbd4f43be877671ca1a3c23ad3f62d5fabaa685b75d38f7fd5",149   "language": "Python",150   "lines": 1,151   "truncated": false,152   "block": 20,153   "row": 12207154  },155  {156   "path": "src/SFS/recursive.sh",157   "sha256": "752308d091a9ab773f8f26af0c63360646970b7f5eec11857aeaaf6490dd50de",158   "language": "Shell",159   "lines": 13,160   "truncated": false,161   "block": 21,162   "row": 2177163  },164  {165   "path": "src/_version.py",166   "sha256": "14cf7c227bf6b7bbd4f43be877671ca1a3c23ad3f62d5fabaa685b75d38f7fd5",167   "language": "Python",168   "lines": 1,169   "truncated": false,170   "block": 20,171   "row": 12207172  },173  {174   "path": "src/extras/Dynamic.py",175   "sha256": "66ab18b5f5bd6925c9d1f746e72cd754337299c2abdad95ffe9df5ee3985dcbc",176   "language": "Python",177   "lines": 43,178   "truncated": false,179   "block": 20,180   "row": 15003181  },182  {183   "path": "src/extras/Examples.R",184   "sha256": "b0d121513a6a3c1c88d3bd7db72260e63a370a7216ca9121b0b605346f9ec58c",185   "language": "R",186   "lines": 20,187   "truncated": false,188   "block": 21,189   "row": 601190  },191  {192   "path": "src/extras/ModelClass.py",193   "sha256": "a75a9d83fd71757e226ff9f18b29a62a9ece0924626121a296d76df6cd385fde",194   "language": "Python",195   "lines": 34,196   "truncated": false,197   "block": 20,198   "row": 14465199  },200  {201   "path": "src/extras/ModelClassTogether.py",202   "sha256": "c84fa7a6bc1d0199f6130c38ffac8126ffc4e9c8daf118b179427a196e55617d",203   "language": "Python",204   "lines": 43,205   "truncated": false,206   "block": 20,207   "row": 14930208  },209  {210   "path": "src/extras/ModelParams.py",211   "sha256": "bbb9409285c000ed4b9ebd78c6eceba85f969a8ff1d5e0bdada01fd1d8fc7878",212   "language": "Python",213   "lines": 32,214   "truncated": false,215   "block": 20,216   "row": 14392217  },218  {219   "path": "src/extras/ModelParamsTogether.py",220   "sha256": "8e7c9674d7374f861b12ad71824e999a0e9fff7d3bad1396780952ce0fbc6ccc",221   "language": "Python",222   "lines": 38,223   "truncated": false,224   "block": 20,225   "row": 14654226  },227  {228   "path": "src/extras/Resume_fit.py",229   "sha256": "28ef7867e1e2c1c5cc631792b7e4b7a77abedf06ef95ec541cb7a83d7fceb4ec",230   "language": "Python",231   "lines": 26,232   "truncated": false,233   "block": 20,234   "row": 14022235  },236  {237   "path": "src/extras/SFSCNNDenseClass.py",238   "sha256": "8f10f379913c8c1316e275bbecedd27f94602ae679362109f2dc507ef44bdf86",239   "language": "Python",240   "lines": 50,241   "truncated": false,242   "block": 20,243   "row": 15434244  },245  {246   "path": "src/extras/SFSCNNDenseParams.py",247   "sha256": "dbdfc64e6ce1b94658d1ad6883ba0f2cdabf5904769ff52bbbbf2338743deb66",248   "language": "Python",249   "lines": 50,250   "truncated": false,251   "block": 20,252   "row": 15443253  },254  {255   "path": "tests/pre-commit.sh",256   "sha256": "a159c7e1520948399c638a329ef491552301f9dc9b998b9837308607afaa0452",257   "language": "Shell",258   "lines": 5,259   "truncated": false,260   "block": 21,261   "row": 1874262  },263  {264   "path": "tests/test_ABCDLS.py",265   "sha256": "0261883edba5b7c82450901f622894c28eb4b721b876b2bdd696d422a48d740a",266   "language": "Python",267   "lines": 280,268   "truncated": false,269   "block": 20,270   "row": 20977271  }272 ]273}