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recursionpharma/rxrx3-core

To accompany OpenPhenom, Recursion is releasing the RxRx3-core dataset, a challenge dataset in phenomics optimized for the research community. RxRx3-core includes labeled images of 735 genetic knockouts and 1,674 small-molecule perturbations drawn from the RxRx3 dataset, image embeddings computed with OpenPhenom, MAE-L/8, MAE-G/8, and associations between the included small molecules and genes. The dataset contains 6-channel Cell Painting images and associated embeddings from 222,601 wells… See the full description on the dataset page: https://huggingface.co/datasets/recursionpharma/rxrx3-core.

sourceHugging Faceupdated 4mo agoView on Hugging Face
14likes2.1kdownloads
fileCellProfiler_features_rxrx3_core.parquet1.36 GBdownload
fileMAE-G_8_PP-16M_trimmed_rxrx3_core_embeddings.parquet2.15 GBdownload
fileMAE-L_8_RPI-93M_rxrx3_core_embeddings.parquet1.32 GBdownload
fileOpenPhenom_rxrx3_core_embeddings.parquet507.4 MBdownload

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